| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0726 |
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| Symbol | |
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| ID | 3366209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 830467 |
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| End bp | 831429 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651071 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_233832 |
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| Protein GI | 66043991 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA ATATAGAACT TCGCGCAGAG GTGCCGTCCG AATTGGGCGG TCAACGCCTC
GATCAAGTCG CCGCACAATT ATTCGCTGAG CACTCGCGCT CGCGCCTTTC CGCCTGGATC
AAGGACGGCC GCCTGACTGT GGACGGAGGC GCTCTGCGCC CTCGCGACAT CGTGCACGGT
GGCGCTGTTC TCGAGCTGAT TGCCGAGCAG GAGGCCCAGG GTGAATGGGT CGCTCAGGAC
ATCGAACTCG ACATCATTTA TGAAGACGAC CAGATCCTCG TCATCAACAA GCCTGCCGGG
CTGGTGGTGC ATCCGGCTGC CGGTCATGCC GATGGCACGC TGCTCAACGC CCTGCTGCAC
CATGTGCCGG ACATCATCAA TGTTCCGCGT GCCGGCATCG TGCACCGTCT GGACAAGGAC
ACCACCGGTC TGATGGTGGT CGCCAAGACC ATTCAGGCAC AGACACAGCT GGTTACCCAG
TTGCAGAGTC GCAGTGTCAG CCGTATCTAC GAGTGCATCG TGATCGGCGT GGTGACCGCA
GGCGGCAAGA TCGACGCACC GATCGGCCGT CACGGCCAGC AGCGTCAGCG CATGGCGGTG
ATGGAAGGCG GCAAGCAGGC GGTCAGTCAT TACCGCGTGC TGGAGCGCTT CCGTTCGCAC
ACCCATGTAC GGGTCAAGCT GGAAACCGGG CGCACCCACC AGATTCGCGT ACACATGGCG
CACATCAACT ACCCGTTGGT CGGCGACCCG GCCTATGGCG GTCGTTTCCG TATTCCGCCA
GCGGCCAGCC TGACCATGGT CGATTCGCTC AAGACCTTCC CGCGGCAGGC GTTGCATGCC
CGCTTCCTGG AGCTGGATCA TCCGACCACC GGTAAGCGCA TGAGCTGGGA ATCGCCATTG
CCGGACGATT TCGTCTGGTT GCTGTCCTTG CTCAAGCAGG ACCGCGAGGC GTTCATCGGG
TGA
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| Protein sequence | MSENIELRAE VPSELGGQRL DQVAAQLFAE HSRSRLSAWI KDGRLTVDGG ALRPRDIVHG
GAVLELIAEQ EAQGEWVAQD IELDIIYEDD QILVINKPAG LVVHPAAGHA DGTLLNALLH
HVPDIINVPR AGIVHRLDKD TTGLMVVAKT IQAQTQLVTQ LQSRSVSRIY ECIVIGVVTA
GGKIDAPIGR HGQQRQRMAV MEGGKQAVSH YRVLERFRSH THVRVKLETG RTHQIRVHMA
HINYPLVGDP AYGGRFRIPP AASLTMVDSL KTFPRQALHA RFLELDHPTT GKRMSWESPL
PDDFVWLLSL LKQDREAFIG
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