| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0720 |
|---|
| Symbol | |
|---|
| ID | 3366203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 824370 |
|---|
| End bp | 824771 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651065 |
|---|
| Product | fimbrial protein pilin |
|---|
| Protein accession | YP_233826 |
|---|
| Protein GI | 66043985 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCGA CATCCAGGGG CTTTACGTTG ATCGAACTCA TGATCGTCGT GGCGATTGTC
GGTATTCTGG CGGCCATCGC GTACCCCAGT TACACCGAGT ACGTGAAGCG CACCCAGCGG
TCGGCGATTG CTAGCCTGCT GTCCGAGCAA ACCCAGGCGC TGGAGCGGTT TTATTCGCAG
AAGGGAAATT ACTCGGATTA CAAAGGCGTA TCTGGTGGTA ATACGTACTA CAAGATAACG
CCGACCCTAA CTGCCACCGA CTTCACCCTG ACAGCTGACC CTATCGGAGG CACGCTGATG
GCTGGCGACA AGTGCGGCAG TTTCGTGATT ACTAACACCG GAGCGCGTAC CAACACGGGC
GCAACCAGCG GCGTCACTGT CAAAGACTGC TGGGGCCGCT AA
|
|---|
| Protein sequence | MRATSRGFTL IELMIVVAIV GILAAIAYPS YTEYVKRTQR SAIASLLSEQ TQALERFYSQ
KGNYSDYKGV SGGNTYYKIT PTLTATDFTL TADPIGGTLM AGDKCGSFVI TNTGARTNTG
ATSGVTVKDC WGR
|
|---|
| |