| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0719 |
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| Symbol | |
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| ID | 3366202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 821149 |
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| End bp | 824358 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637651064 |
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| Product | type IV pilus-associated protein, putative |
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| Protein accession | YP_233825 |
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| Protein GI | 66043984 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.677662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTG CTAAGGCGCT TCGTGGTGGC TTGAAATACC TCTATGGCGC GCTGTTGGCG
TTGTATCTGG CAAGCCCTGT TTATGCCTTC ACGCCAGCGC AAGTGCCCTT GTTGAGCTCT
CCGGCGGTGC CACCGAACCT TATGCTGCTC GTCGATAACT CGGGCAGTAT GTACAACATC
ATCTGGGATT CGGGGTTTGA TGCCTCGGTC AATCGTCCTA ACATCAGCTA CTACTCGACT
CAGTGTCTCA GTGGCGTGAT CACTGTTGTA TGTCCGTTCA TAACGACACT TTCGGATGAC
GATACCCTGT CGGTGGGTGA TATCAATGCC TACAGTATTT TCACCCTGTC ACTGATGTGT
CCATTTGGCG GGCGTCCGGT TTTTCGCAAT AACACTCAGT ATTGCCTTAA CCTGCCCGAT
CCGGCCGGGA ACGGGCTGAC GCGATATACC GCTGATTACC TGTCCTACCT CATTGATCTG
GTCCGTCCCA ATTTCTTTGG TGTACGCGAC TACACTAATG GCGTGATCCC CAACGATTAC
CGAATGAACG TCGCGAAAAC CGTGGCGACC AATCTGGTGA CCAACAACAC GTCGCTCAGA
ATCGGTCTTG CCACGTTCAA TGATCCAAAC AATTTTGATT TAGGGCCCGG AGGCAAGATA
GCCAGGGTTG TTTCGGACCT GTCGCCGGTA GCGATCAGTA CCTATCAAAC CACGGGTGTC
TCTCAACAGA AGGCTACTCA AAATATCACT GACCTCAAAA CGGCTATCAG CAACCTGACG
CCGTCAGCCA ATACCCCGCT GGCGGAAACC TACTATGAGA TCACCCGCTA TTTTCGGGGC
ATGACGCCGT TCTATCAAAG CGGATCGACC TATGTGAGCC CGATCCAGTA CCGCTGCCAG
AAAAACTACG GTGTCGTTAT AACCGATGGC TTGCCGACCT ATGACCGGAC GTTCCCGACC
AACGACCCTG ACGATGTTCT GGACACCACT CGCTCGCTAC CCAACTGGGA TTTGAACGCA
GCCAATGACG GTGCCAACCT GTCTGGCGAT GGTGAGGGCG ATACGCTGTA TCTGGACGAT
CTTGCCAAGT TCGCCTATGA CATTGACCTG CGTCGGGATG CTGTGACAAC GGGCGGGGAT
CTGACCGGCA AAAGTTGGGA CACTGCCGGC TTCGTAAAAC AGGATCTCAG TACTTACACC
ATCGGCTTTA CGGCCTCGAA CCAGATGTTG ATCGATGCGG CGGATGATAA TCATGGTCAC
GGCAAATACT TTCAGGCCAA CGACAGTTCG GGGCTCAGCT CGGCGCTGGA TCTCGCATTA
AGCGACATCT ACGCCAAAGT CGGCTCTGGC GCAGGGGGCG CGGCAAACTC ATCGACGTTT
CAGACAGGTA CTCAGTTCTA TCAGGCGCTT TACGATCCAA GCGATTGGCA CGGCACTATC
AAAGCCTTCA ATCTGGATCA GATAACAGGT GCCTTGAGCG CGCCTGTCTG GACGACTGAC
ACGGCTATTG TCACTGGCTC GACGCCGCCG GTATTCGAGT CGTGGAGCAC GCTTGCCACT
CCGACGAAGA TTCCCTTGGA GTATGCCAGT TTCAGCCCTG CTCAACAGGC TGCGCTGAAT
GCGACGTTGC CAACCAATGC CACCGGAGCA GAGCTTATTG CCTGGGTCAA GGGCACCGCC
AATGCGAAGT TCCGGACACG TACCCGGCTG CTGGGCGATA TCGTCAACTC TTCGCTCGGT
ATTGCACTCC CTTCACAGAA GACCGCCTCT GACCTGACCG GTGACACCAC CTACACCACG
TATCTGGCCA CCAAGGCAAA CAGCATGACC CCCAGCATTC TGGCCAATGC CAATGACGGC
TTTTTCAACG TCATCAATAC CAGTGATGGT TCAAGACGAT ATGCATACAT GCCATCCACT
GCGCTGACTT CGCTGGCTAC CATTGCTTCG ACCAATTATG GATCCGGCGT ACACAAGTTC
ACCGTGGATG GGCAGATTGC GGTGTTCGAT ACACAGCTGT CAGCCGGCTC ATCGTGGCGC
ACCGTTGCTT ATGGCGGCAC TGGCGCCGGT GGCAAAGCGT TCTTCGCCAT CAAGCTATTC
GAGGGCACGA GTAACACCGT CAGCGCGTTA TGGGAGGTCA AGGCACCTGA CACGTCCGAC
ACCAACAACA AATTCAACAA CCTTGGATAC GCCTATTCCA AACCGGATGT TGCGCGGATG
GCGGATGGCA CCGGGATTGT GGTGGTCGGG AACGGCTACG GCAGTTTCAC CGGCAGAGCG
TCGCTCTATG TACTGAATGC CAATACCGGG GCGTTCATTG CCGAGATCCA GACGCCGGTG
CTTAACAACG AAACCGATAA CGGGCTTTCT TCGGTCAAAT TGCGTGTCAA CGCTCAGAAC
GTGGTTCAGG CTGCCTACGC TGGCGACCTG AAAGGTCGGC TCTGGAAGTT CGACATGAGC
GGCGCCACCG CCGCCAGCTG GAAGGTGGCT TTTGGCGGCG CGCCGTTGTT CACGGCACCG
CGCGGCGCCA ACCAACCGAT AACGGTTCAG CCCTTCGTGC TCGATCATCC GCTCAACGGC
AAGCTCGTTT ATTTCGGGAC GGGCAAGTTC ATCGAAGTCG CAGACAAGCA GACCACCGCT
CTTCAGGATT TTTACGCGAT ATGGGATGCC GACTCCGGGA CGGGCAGTAC CGTCGAGGCG
AACCTTCAGG CGCAGGCGGT CAATGGCAGC GTTGTCAGCA ACGGAACCAC CTATTTCACG
TCGACAACCA ACGATGTGGA CTGGTCAGTC AAGAAAGGCT GGTACATGCC GCTCTCGGCC
GTGACGCCCT ACCTGGGCGA GCGGATCATT TACCCCGCGC AGACCAGCCG GGGGCGGATC
ATCTTCTCGA CGGCCTCCGT GAACTCCGCC GACCCTTGTG AGAGCACCGG TACCGGTCGT
GTATTCGAGC TCAATGCTGC GACTGGCAGC ATGCTTAACT ATCAGGTGCT CGATACCAGC
GGCGATAACG CTATCAACAG TTCAGACCTG CTTGTCGCGG GACTGGGATA CACCGGCATC
CCGGTCGTCT CGGCTATTGT CGCGGGTACG GGGGACGGCA ACGAGGTGAA GATCGTCAAT
AACTCCACCG GCAACACGCC TGATCGCCTG AAGGAAAAGG GCGGAAGTGG TAACGTTTAC
CAACGCATCA TGTGGCGACA AATCCAATAG
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| Protein sequence | MPTAKALRGG LKYLYGALLA LYLASPVYAF TPAQVPLLSS PAVPPNLMLL VDNSGSMYNI
IWDSGFDASV NRPNISYYST QCLSGVITVV CPFITTLSDD DTLSVGDINA YSIFTLSLMC
PFGGRPVFRN NTQYCLNLPD PAGNGLTRYT ADYLSYLIDL VRPNFFGVRD YTNGVIPNDY
RMNVAKTVAT NLVTNNTSLR IGLATFNDPN NFDLGPGGKI ARVVSDLSPV AISTYQTTGV
SQQKATQNIT DLKTAISNLT PSANTPLAET YYEITRYFRG MTPFYQSGST YVSPIQYRCQ
KNYGVVITDG LPTYDRTFPT NDPDDVLDTT RSLPNWDLNA ANDGANLSGD GEGDTLYLDD
LAKFAYDIDL RRDAVTTGGD LTGKSWDTAG FVKQDLSTYT IGFTASNQML IDAADDNHGH
GKYFQANDSS GLSSALDLAL SDIYAKVGSG AGGAANSSTF QTGTQFYQAL YDPSDWHGTI
KAFNLDQITG ALSAPVWTTD TAIVTGSTPP VFESWSTLAT PTKIPLEYAS FSPAQQAALN
ATLPTNATGA ELIAWVKGTA NAKFRTRTRL LGDIVNSSLG IALPSQKTAS DLTGDTTYTT
YLATKANSMT PSILANANDG FFNVINTSDG SRRYAYMPST ALTSLATIAS TNYGSGVHKF
TVDGQIAVFD TQLSAGSSWR TVAYGGTGAG GKAFFAIKLF EGTSNTVSAL WEVKAPDTSD
TNNKFNNLGY AYSKPDVARM ADGTGIVVVG NGYGSFTGRA SLYVLNANTG AFIAEIQTPV
LNNETDNGLS SVKLRVNAQN VVQAAYAGDL KGRLWKFDMS GATAASWKVA FGGAPLFTAP
RGANQPITVQ PFVLDHPLNG KLVYFGTGKF IEVADKQTTA LQDFYAIWDA DSGTGSTVEA
NLQAQAVNGS VVSNGTTYFT STTNDVDWSV KKGWYMPLSA VTPYLGERII YPAQTSRGRI
IFSTASVNSA DPCESTGTGR VFELNAATGS MLNYQVLDTS GDNAINSSDL LVAGLGYTGI
PVVSAIVAGT GDGNEVKIVN NSTGNTPDRL KEKGGSGNVY QRIMWRQIQ
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