| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0717 |
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| Symbol | |
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| ID | 3366200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 819949 |
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| End bp | 820656 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637651062 |
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| Product | type IV pilus assembly protein PilW |
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| Protein accession | YP_233823 |
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| Protein GI | 66043982 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC TTTCCAGAGG CTTCGGCCTG GTCGAAATCA TGGTGGCGCT GGTCCTGGGA
CTGGTGGTCA GTCTCGGTAT CGTGCAGATA TTCACGGCTG CCAGAGGCAC CTACCAGAGC
CAGAATGCCG CAGCGCGGAT GCAGGAGGAT GCGCGTTTCC TGCTGAGCAA GCTGATGCAG
GAAATCAGGA TGACCGGCAT GTATGGCTGC CTGAGCTTCA GTAACTACAC GCCTGTATCT
CCTGCTATCC CGTGGCCGAT CGCACTGGAT ACTCCAATTC TCTGGGATAA TCCGAGCAGG
ACGCTGACGC TGGTGACCGC CGACGTGGGG ACCACAGGCA GTACGCCCAC CTGGACCATT
GTTTCAGACT GTCAGTCTAC GACACAGCTC TACGCCAGTA AGCGTGCGCC TGCTGCGGGG
GAGACGGCCT TTCCGTTGCG GCAGTTGGTC TACACGCTGA CGGGAACAAA CCTGACCATC
CAGTACGGCA CGGGGGGCGA TGTGCAACCA CTTTTACAGA ACGTCGCAGA CTTCAGTGTT
TCCTTCGGCA TGGCGGGTAA CCCGATGTCC TATACCACGG CCGTTACCAA AGCCAATGCC
GACGCTGTAC GCAGTGTCCG CATCAGCCTG ACGCTGCAGG ATGGACAGAA CGGCATCGTC
AAGTCTCAGC AGTACAACGT TGTTGCTTAT CTGCGTAACC GCTTTTGA
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| Protein sequence | MRKLSRGFGL VEIMVALVLG LVVSLGIVQI FTAARGTYQS QNAAARMQED ARFLLSKLMQ
EIRMTGMYGC LSFSNYTPVS PAIPWPIALD TPILWDNPSR TLTLVTADVG TTGSTPTWTI
VSDCQSTTQL YASKRAPAAG ETAFPLRQLV YTLTGTNLTI QYGTGGDVQP LLQNVADFSV
SFGMAGNPMS YTTAVTKANA DAVRSVRISL TLQDGQNGIV KSQQYNVVAY LRNRF
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