Gene Psyr_0713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0713 
SymbolispH 
ID3366196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp817378 
End bp818325 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content62% 
IMG OID637651058 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_233819 
Protein GI66043978 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA AACTCGCCAA CCCCCGCGGC TTTTGTGCCG GAGTGGACCG CGCGATCGAA 
ATCGTCAATC GCGCTCTGGA AGTGTTTGGT CCGCCGATTT ATGTGCGCCA TGAAGTCGTT
CACAACAAAT TTGTCGTCGA GGACCTGCGC TCTCGCGGTG CGATCTTCGT TGAAGAGCTG
GATCAGGTGC CGGATGACGT CATCGTTATC TTCAGTGCCC ACGGTGTCTC CCAGGCTGTG
CGTACCGAGG CGGCAGGCCG TGGCTTGAAA GTCTTCGATG CTACCTGTCC GCTGGTGACC
AAGGTGCATA TCGAGGTCGC CCGTTACAGC CGTGACGGCC GCGAGTGCAT CCTGATCGGC
CACGCCGGTC ACCCGGAAGT CGAAGGCACC ATGGGCCAGT ACGACGCCGC CAACGGCGGT
GCGATCTATC TGGTCGAGGA CGAAGAGGAT GTTGCCAGCC TGCAAGTGCG CAACCCTGAA
GCCCTGGCCT TCGTGACCCA GACCACCTTG TCCATGGATG ACACCAGCCG GGTGATCGAT
GCCTTGCGCA AGCGTTTCCC GGCCATTGGC GGGCCGCGCA AGGACGACAT CTGCTACGCC
ACGCAAAACC GTCAGGACGC AGTCAAGCAA CTGGCCGATG AATGCGATGT GGTGTTGGTG
GTGGGCAGTC CGAACAGCTC CAACTCCAAT CGCCTGCGTG AGCTGGCCGA GCGCATGGCG
ACTCCGGCCT ACCTCATCGA CGGCGCCGAA GACATGCAAC AAGGCTGGTT CGACGGGGTG
GAGCGTATTG GTATCACTGC GGGCGCTTCG GCCCCCGAAG TGCTGGTGCG CGGCGTGATC
CAGCAATTGC AGGCCTGGGG CGCGACCGGT GCGGATGAGC TTGCCGGCCG CGAGGAGAAC
ATCACCTTCT CGATGCCCAA GGAATTGCGC GTCAAGTCGC TGCTCTGA
 
Protein sequence
MQIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR SRGAIFVEEL 
DQVPDDVIVI FSAHGVSQAV RTEAAGRGLK VFDATCPLVT KVHIEVARYS RDGRECILIG
HAGHPEVEGT MGQYDAANGG AIYLVEDEED VASLQVRNPE ALAFVTQTTL SMDDTSRVID
ALRKRFPAIG GPRKDDICYA TQNRQDAVKQ LADECDVVLV VGSPNSSNSN RLRELAERMA
TPAYLIDGAE DMQQGWFDGV ERIGITAGAS APEVLVRGVI QQLQAWGATG ADELAGREEN
ITFSMPKELR VKSLL