Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0713 |
Symbol | ispH |
ID | 3366196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 817378 |
End bp | 818325 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651058 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_233819 |
Protein GI | 66043978 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCA AACTCGCCAA CCCCCGCGGC TTTTGTGCCG GAGTGGACCG CGCGATCGAA ATCGTCAATC GCGCTCTGGA AGTGTTTGGT CCGCCGATTT ATGTGCGCCA TGAAGTCGTT CACAACAAAT TTGTCGTCGA GGACCTGCGC TCTCGCGGTG CGATCTTCGT TGAAGAGCTG GATCAGGTGC CGGATGACGT CATCGTTATC TTCAGTGCCC ACGGTGTCTC CCAGGCTGTG CGTACCGAGG CGGCAGGCCG TGGCTTGAAA GTCTTCGATG CTACCTGTCC GCTGGTGACC AAGGTGCATA TCGAGGTCGC CCGTTACAGC CGTGACGGCC GCGAGTGCAT CCTGATCGGC CACGCCGGTC ACCCGGAAGT CGAAGGCACC ATGGGCCAGT ACGACGCCGC CAACGGCGGT GCGATCTATC TGGTCGAGGA CGAAGAGGAT GTTGCCAGCC TGCAAGTGCG CAACCCTGAA GCCCTGGCCT TCGTGACCCA GACCACCTTG TCCATGGATG ACACCAGCCG GGTGATCGAT GCCTTGCGCA AGCGTTTCCC GGCCATTGGC GGGCCGCGCA AGGACGACAT CTGCTACGCC ACGCAAAACC GTCAGGACGC AGTCAAGCAA CTGGCCGATG AATGCGATGT GGTGTTGGTG GTGGGCAGTC CGAACAGCTC CAACTCCAAT CGCCTGCGTG AGCTGGCCGA GCGCATGGCG ACTCCGGCCT ACCTCATCGA CGGCGCCGAA GACATGCAAC AAGGCTGGTT CGACGGGGTG GAGCGTATTG GTATCACTGC GGGCGCTTCG GCCCCCGAAG TGCTGGTGCG CGGCGTGATC CAGCAATTGC AGGCCTGGGG CGCGACCGGT GCGGATGAGC TTGCCGGCCG CGAGGAGAAC ATCACCTTCT CGATGCCCAA GGAATTGCGC GTCAAGTCGC TGCTCTGA
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Protein sequence | MQIKLANPRG FCAGVDRAIE IVNRALEVFG PPIYVRHEVV HNKFVVEDLR SRGAIFVEEL DQVPDDVIVI FSAHGVSQAV RTEAAGRGLK VFDATCPLVT KVHIEVARYS RDGRECILIG HAGHPEVEGT MGQYDAANGG AIYLVEDEED VASLQVRNPE ALAFVTQTTL SMDDTSRVID ALRKRFPAIG GPRKDDICYA TQNRQDAVKQ LADECDVVLV VGSPNSSNSN RLRELAERMA TPAYLIDGAE DMQQGWFDGV ERIGITAGAS APEVLVRGVI QQLQAWGATG ADELAGREEN ITFSMPKELR VKSLL
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