| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0711 |
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| Symbol | lspA |
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| ID | 3366194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 816344 |
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| End bp | 816850 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651056 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_233817 |
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| Protein GI | 66043976 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.395122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAACG CCTCGTTTGG CCGTCTGGCC TGGCTGTGGT TGAGCGTGCT GGTTCTGGTC
ATTGACCAGG CCAGCAAGTA TTACTTCGAG AACGCGTTGA GCCTGTATCA GCAGATCATC
GTGATTCCCG ACCTGTTCAG CTGGACCCTG GCCTACAACA CCGGTGCCGC CTTCAGTTTT
CTGGCCGACG GTGCCGGCTG GCAGCGCTGG CTGTTCGCCC TGATCGCGGT GGTGGTCAGC
GCCGTGCTGG TCGTCTGGCT CAAACGCCTG GGTCGTGACG ACACGTGGCT GGCCGTTGCA
CTGGCGCTGG TGCTGGGCGG CGCACTGGGC AACCTCTACG ACCGTATCGT GCTGGGCCAC
GTGATCGACT TCATCCTGGT TCACTGGCAG AACCGCTGGT ACTTCCCTGC ATTCAACGTC
GCGGACAGTG CGATCAGCGT CGGCGCAGTC ATGCTGGCGC TGGACATGTT CAAGAGCAAG
AAAACCGGAG AGACCGTCAA TGACTGA
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| Protein sequence | MPNASFGRLA WLWLSVLVLV IDQASKYYFE NALSLYQQII VIPDLFSWTL AYNTGAAFSF
LADGAGWQRW LFALIAVVVS AVLVVWLKRL GRDDTWLAVA LALVLGGALG NLYDRIVLGH
VIDFILVHWQ NRWYFPAFNV ADSAISVGAV MLALDMFKSK KTGETVND
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