Gene Psyr_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0690 
Symbol 
ID3366173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp794145 
End bp795032 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID637651037 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_233798 
Protein GI66043957 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG CATTTATCGG TCTGGGCAAT ATGGGCGCGC CCATGGCCCG CAACCTGATC 
AGAGCCGGTC ACGCCTTGCA GGTGTTCGAC CTCAACAAGA GCGTACTGGC TGAATTCGCC
GAGCTGGGCG CACAGGTCAG CGATTCACCC GCACAGGCGG CCCAAGGCAC TGAACTGGTC
ATCACCATGC TGCCCGCCGC GGCGCACGTG CGCAGCGTGT ACCTGAATGA CGACGGCGTT
TTGAAGGGGA TCTCGCCCGG AGTTCCGGCG GTTGATTGCA GCACCATCGA CCCGCAGACC
ATTCGCGACA TCGCCGCGGT CGCTGCGCAG CAAGGCGTGG TGTTGGGCGA TGCGCCGGTG
TCGGGCGGCA CCGGTGGGGC GCAGGCCGGT ACGTTGACCT TCATGGTCGG AGGCTCTGCC
GGTCATTTCG CTGTGCTCAA ACCAGTGCTG GAACAGATGG GCCGCAACAT CGTGCATTGT
GGTGACGTGG GCACCGGCCA GATCGCCAAG ATCTGCAACA ACATGCTGCT GGCGATTTCC
ATGATCGGCG TGGCCGAGTC CATGGCCTTG GGCAATGCGC TGGGTATCGA CACCGAAGTG
CTGGCCGGCA TCATCAATAC CTCGACCGGT CGCTGCTGGA GTTCCGAGGC CTATAACCCG
TGGCCCGGCA TCGTCGAAAG CGCGCCCTCG TCACGCGGTT ACAGCGGCGG CTTTGGCGCC
GAACTGATGC TCAAGGACCT GGGCCTGGCA ACCGAGGCCG CGCGCTCGGC GCATCAACCG
GTCATCCTCG GCGCAGTGGC GCAACAGCTG TACCAGGCGA TGAGCCTGCG TGGCGATGGC
GGCAAGGATT TCTCGGCGAT CATTGAGGGG TATCGCCCGA AAGCGTAG
 
Protein sequence
MNIAFIGLGN MGAPMARNLI RAGHALQVFD LNKSVLAEFA ELGAQVSDSP AQAAQGTELV 
ITMLPAAAHV RSVYLNDDGV LKGISPGVPA VDCSTIDPQT IRDIAAVAAQ QGVVLGDAPV
SGGTGGAQAG TLTFMVGGSA GHFAVLKPVL EQMGRNIVHC GDVGTGQIAK ICNNMLLAIS
MIGVAESMAL GNALGIDTEV LAGIINTSTG RCWSSEAYNP WPGIVESAPS SRGYSGGFGA
ELMLKDLGLA TEAARSAHQP VILGAVAQQL YQAMSLRGDG GKDFSAIIEG YRPKA