Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0690 |
Symbol | |
ID | 3366173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 794145 |
End bp | 795032 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637651037 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_233798 |
Protein GI | 66043957 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACATCG CATTTATCGG TCTGGGCAAT ATGGGCGCGC CCATGGCCCG CAACCTGATC AGAGCCGGTC ACGCCTTGCA GGTGTTCGAC CTCAACAAGA GCGTACTGGC TGAATTCGCC GAGCTGGGCG CACAGGTCAG CGATTCACCC GCACAGGCGG CCCAAGGCAC TGAACTGGTC ATCACCATGC TGCCCGCCGC GGCGCACGTG CGCAGCGTGT ACCTGAATGA CGACGGCGTT TTGAAGGGGA TCTCGCCCGG AGTTCCGGCG GTTGATTGCA GCACCATCGA CCCGCAGACC ATTCGCGACA TCGCCGCGGT CGCTGCGCAG CAAGGCGTGG TGTTGGGCGA TGCGCCGGTG TCGGGCGGCA CCGGTGGGGC GCAGGCCGGT ACGTTGACCT TCATGGTCGG AGGCTCTGCC GGTCATTTCG CTGTGCTCAA ACCAGTGCTG GAACAGATGG GCCGCAACAT CGTGCATTGT GGTGACGTGG GCACCGGCCA GATCGCCAAG ATCTGCAACA ACATGCTGCT GGCGATTTCC ATGATCGGCG TGGCCGAGTC CATGGCCTTG GGCAATGCGC TGGGTATCGA CACCGAAGTG CTGGCCGGCA TCATCAATAC CTCGACCGGT CGCTGCTGGA GTTCCGAGGC CTATAACCCG TGGCCCGGCA TCGTCGAAAG CGCGCCCTCG TCACGCGGTT ACAGCGGCGG CTTTGGCGCC GAACTGATGC TCAAGGACCT GGGCCTGGCA ACCGAGGCCG CGCGCTCGGC GCATCAACCG GTCATCCTCG GCGCAGTGGC GCAACAGCTG TACCAGGCGA TGAGCCTGCG TGGCGATGGC GGCAAGGATT TCTCGGCGAT CATTGAGGGG TATCGCCCGA AAGCGTAG
|
Protein sequence | MNIAFIGLGN MGAPMARNLI RAGHALQVFD LNKSVLAEFA ELGAQVSDSP AQAAQGTELV ITMLPAAAHV RSVYLNDDGV LKGISPGVPA VDCSTIDPQT IRDIAAVAAQ QGVVLGDAPV SGGTGGAQAG TLTFMVGGSA GHFAVLKPVL EQMGRNIVHC GDVGTGQIAK ICNNMLLAIS MIGVAESMAL GNALGIDTEV LAGIINTSTG RCWSSEAYNP WPGIVESAPS SRGYSGGFGA ELMLKDLGLA TEAARSAHQP VILGAVAQQL YQAMSLRGDG GKDFSAIIEG YRPKA
|
| |