| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0680 |
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| Symbol | |
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| ID | 3366163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 777540 |
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| End bp | 781013 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651027 |
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| Product | exodeoxyribonuclease V, RecC subunit |
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| Protein accession | YP_233788 |
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| Protein GI | 66043947 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1330] Exonuclease V gamma subunit |
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| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTA CAACCTCTCT GAGTGCAGGC TTCATGGTGG TTCAAGGCAA CCGCCCGGAT
GAACTGCGCA GTCTGGTTGT GTCCTGGATG CGGCGTTATC CATTGGCGCC CCTGGAAAAC
GAGATTGCTC TGGTGCAGAG CAACGGCATT GCACAGTGGC TGAAGTTGGC CTTGGCCGAA
GATGCTCAGG ATGAAGATAA CGGTGGCTGT GGTATCGCTG CCGCCATCGA CGTCCAGTTG
CCCGGCAGTT TCATGTGGAC GCTGTATCGC ATGGTGCTGG GTGCGGATGA GATCCCCCAG
ACGTCCTTGC TCGACAAGAC CCCTTTGACC TGGCGCTTGA TGCGCTTGTT GCCGTCGCTG
ATCAATCAGC CGCACTTCGA GCCGCTGCAG CGCTTCCTGA CCGACGACAC TGATCTGCGC
AAGCGCTATC AATTGTCCGA ACGCCTGTCC GATCTGTTCG ACCAATATCA GGTTTACCGG
GCTGACTGGC TGCAAGACTG GGCCGCTGGC CGCCATCAAT TGCGCGACGT ACGAGGTCAG
TCCAGACCAT TGTCAGCTGC CAATTGCTGG CAAGCCGAAC TGTGGCGCGC GTTGCTGGAC
GACGTCGGGG CTGAAGGGAT GTCGCAGAGC CGTGCAGGCG TGCATCAGCG CTTCATCGAG
CGCATCGGCA ACATGACCGA AGCGCCACCG GGCTTGCCGG CACGGGTCAT TGTTTTCGGC
ATTTCGTCAC TGCCGGCACA AGCGCTCGAG GCGTTGGCAG GGCTGGCCAG ATTCAGTCAG
GTTCTGCTCT GTGTGCACAA TCCGTGTCGT CACCACTGGA CCGATATCGT CGCCGACAAG
GACCTGTTGC GTCACCAGTA CAAGCGTCAG GCGCGCAAGA GCGGCATGCC GATGGTCCTC
GACCCGCAAG CGCTGCATCA GCATGCTCAT CCGTTGCTCG CGGCCTGGGG CAAGCAGGGA
CGTGATTACA TCAACTTGCT GGACAGCCAC GACGACCCAC GCAGCTACCG TTCCTCGTTC
AAGGACGAGC GCATTGACCT GTTCAGTGAG TCAGAGCCCA CCAACCTCCT GAACCAGCTG
CAGGACGATA TCCTTGAGCT GCGTCCGCTG GATGAAACCC GTGAGCTGTG GCCGGCAGTC
AATCCTTCTG AGGACCGCTC GATCCGCTTC CATGTGGCTC ACAGCGCGCA GCGCGAAGTA
GAGGTGCTGC ATGACCAGCT ACTGGCGAGA TTCAGCAAAG ACCCTGGCCT GCGCCCGCGT
GACGTGATTG TCATGGTCCC GGATATCGAC AGCTATGCCC CGCACATACG AGCAGTATTC
GGGCAGATCG AGCGCGAAGA TCGTCGCTTC ATCCCCTTTA CGCTGGCTGA CCAGGGCCAG
CGCGGCCGCG AGCCGTTGCT GATTGCTGTC GAGCACCTGC TCAAACTCCC GGACAGCCGT
TTCCCGGTCA GCGAGATTCT CGACCTGCTG GACGTTCCAG CCTTGCGCGC ACGCTTCAGG
ATTCAGGAGC GTGACCTGCC AACGCTGCAT CGCTGGATAG AAGGCGCAGG TATTCGTTGG
GGCCTCAATG CTCAACAGCG TGCCGGTCTG GGGCTGCCGG ATGCCCTTGA GCAGAACAGC
TGGCATTTCG GCCTGCGTCG CATGTTGCTG GGTTACGCCG TGGGTGCCGG CGCGGCTTAC
GACGGCATCG AACCCTACGA TGAGATCGGC GGGCTTGATG CGGCGTTGAT CGGTCCGCTG
GTCGCGTTGA TTGATGCTCT CCAGGTCGCC CACACAGAGT TGTCGACACC CACCACTCCG
GAAGCATGGG GTGCTCGCCT GCAATCGCTG CTGCAGTTGT TCTTCCTCGC CGACAGCGAG
CATGACGACT ACTTGCTTGC CCAGCTTGAA ACACTGCGCG AGAACTGGCT GGAAACCTGT
GCAACGGTAA GACTGACCGA TGAGCTGCCG CTGACCGTTG TGCGTGAGGC CTGGCTGGCC
GGGCTCGATC AAGGGCGCCT GTCCCAGCGT TTTCTGGCGG GCTCGGTCAA CTTCTGCACG
CTGATGCCCA TGCGCGCCAT CCCGTTCAAA GTGGTCTGCC TGTTAGGCAT GAACGACGGC
GATTACCCGC GTGCGCAACC GCCGCTGGAT TTCGATCTGA TGGGCAGCGA TTACCGACCC
GGCGACCGCT CCCGGCGTGA AGACGATCGC TACCTGTTGC TGGAAGCCTT GCTCTCGGCC
AGAGACCAGT TGTACGTCAG TTGGGTTGGC CATAGCATTC GTGACAACAG TGAGCGTCCA
GCTTCGGTGC TCATCGGTCA GCTGCGCGAT CACCTCGCCA GTGGCTGGAA GCTGGCCGGC
GAGACCGATC CGGACGGTAA ACACGATGAT CAGCGCTTGC TGAAAGCCCT GACTGTGAAT
CACCCGTTGC AACCCTTCAG CGCCAATTAC TTCCACGCCG GCACAGGTTA TTTCAGCTTC
GCCCGCGAGT GGCGCCTGCT GCATGAAACC GACCTTCAGG TGCCCGTGCC TCAAGCGCTG
CCGGCTCATG AACAGGAAGA ACCGCTGTCC ATTGCGCAGT TACAGGATTT CCTGAGAAAC
CCGGTAAAGC ACTTTTTCAG TCAGCGCCTG AAGATCTATT TCGAGGTGGC TGAAGCGCCG
CTCGCCGATG AGGAACCGTT CGTGCTCGAT GCCCTTGAGC GTTACGGCCT CAGTGAAAGC
CTGCTCAGCG CAGCGATGGT TTCCCCTGAC GATATGGATG CCGCCCTGAA AACCCAGGCG
CTGAAACTGC AAGCCAGTGG ACTGCTGCCG CTCGCGGGCT TCGGCACCTT GATGCAGAGC
GAGCTGATCG AGCCGCTGCC TGACGTACTC AGGCGCTACC ACGATCTGTT GACCCTCTGG
CCCGAGACCC TGAGCAGCGC TTTACCGATC GGCTTCAGCC ATGCGGGTGT GAGCATCGAC
GGCTGGCTGG GCGGGCTGCA CCGTAACGCC CGTGGCGAGC TGTTGCTGGT CACTGCAATT
CCCAACAGCA TCGGCTCGAA AAAGACCCGC AAGTGGCACC GGCTGATTCG GCCGTGGGTC
AATCACCTGG TGGCGTGCGC CTGCGACCTG CCGTTGAGCA CGGCACTGGT CGCCAGTGAT
GAAACCCTGA TGCTGGAGCC GCTGGACAAG GCGAGTGCCG TCACCACGCT CAATCACTTG
CTGACGGCCT GGCTGCACGG CATGCAAGAA CCCCTTCCGG TGGCGGTCAA AACCGCCTTC
GCCTGGTTGG GCCAGCCTGC CGACAAAGCC GAAGCGGCTG CCCGCAAAGC CTACGAAGGT
GACGGACAGA CTACCGATGG CGAGCGCCGC GAAAGCACGG CACTGGCTCG GCAGTTTCCC
GACTTTGACG CACTGATCGA CAGTGAAGAA TTCGCAGGCT GGTGCGAGAC GCTCTACAAA
CCGATTTACG ACGCGCCCTG GCAGTCGTTG TCCGGCGGGG AGGGCGGCGC ATGA
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| Protein sequence | MSVTTSLSAG FMVVQGNRPD ELRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE
DAQDEDNGGC GIAAAIDVQL PGSFMWTLYR MVLGADEIPQ TSLLDKTPLT WRLMRLLPSL
INQPHFEPLQ RFLTDDTDLR KRYQLSERLS DLFDQYQVYR ADWLQDWAAG RHQLRDVRGQ
SRPLSAANCW QAELWRALLD DVGAEGMSQS RAGVHQRFIE RIGNMTEAPP GLPARVIVFG
ISSLPAQALE ALAGLARFSQ VLLCVHNPCR HHWTDIVADK DLLRHQYKRQ ARKSGMPMVL
DPQALHQHAH PLLAAWGKQG RDYINLLDSH DDPRSYRSSF KDERIDLFSE SEPTNLLNQL
QDDILELRPL DETRELWPAV NPSEDRSIRF HVAHSAQREV EVLHDQLLAR FSKDPGLRPR
DVIVMVPDID SYAPHIRAVF GQIEREDRRF IPFTLADQGQ RGREPLLIAV EHLLKLPDSR
FPVSEILDLL DVPALRARFR IQERDLPTLH RWIEGAGIRW GLNAQQRAGL GLPDALEQNS
WHFGLRRMLL GYAVGAGAAY DGIEPYDEIG GLDAALIGPL VALIDALQVA HTELSTPTTP
EAWGARLQSL LQLFFLADSE HDDYLLAQLE TLRENWLETC ATVRLTDELP LTVVREAWLA
GLDQGRLSQR FLAGSVNFCT LMPMRAIPFK VVCLLGMNDG DYPRAQPPLD FDLMGSDYRP
GDRSRREDDR YLLLEALLSA RDQLYVSWVG HSIRDNSERP ASVLIGQLRD HLASGWKLAG
ETDPDGKHDD QRLLKALTVN HPLQPFSANY FHAGTGYFSF AREWRLLHET DLQVPVPQAL
PAHEQEEPLS IAQLQDFLRN PVKHFFSQRL KIYFEVAEAP LADEEPFVLD ALERYGLSES
LLSAAMVSPD DMDAALKTQA LKLQASGLLP LAGFGTLMQS ELIEPLPDVL RRYHDLLTLW
PETLSSALPI GFSHAGVSID GWLGGLHRNA RGELLLVTAI PNSIGSKKTR KWHRLIRPWV
NHLVACACDL PLSTALVASD ETLMLEPLDK ASAVTTLNHL LTAWLHGMQE PLPVAVKTAF
AWLGQPADKA EAAARKAYEG DGQTTDGERR ESTALARQFP DFDALIDSEE FAGWCETLYK
PIYDAPWQSL SGGEGGA
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