Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0680 |
Symbol | |
ID | 3366163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 777540 |
End bp | 781013 |
Gene Length | 3474 bp |
Protein Length | 1157 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651027 |
Product | exodeoxyribonuclease V, RecC subunit |
Protein accession | YP_233788 |
Protein GI | 66043947 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTTA CAACCTCTCT GAGTGCAGGC TTCATGGTGG TTCAAGGCAA CCGCCCGGAT GAACTGCGCA GTCTGGTTGT GTCCTGGATG CGGCGTTATC CATTGGCGCC CCTGGAAAAC GAGATTGCTC TGGTGCAGAG CAACGGCATT GCACAGTGGC TGAAGTTGGC CTTGGCCGAA GATGCTCAGG ATGAAGATAA CGGTGGCTGT GGTATCGCTG CCGCCATCGA CGTCCAGTTG CCCGGCAGTT TCATGTGGAC GCTGTATCGC ATGGTGCTGG GTGCGGATGA GATCCCCCAG ACGTCCTTGC TCGACAAGAC CCCTTTGACC TGGCGCTTGA TGCGCTTGTT GCCGTCGCTG ATCAATCAGC CGCACTTCGA GCCGCTGCAG CGCTTCCTGA CCGACGACAC TGATCTGCGC AAGCGCTATC AATTGTCCGA ACGCCTGTCC GATCTGTTCG ACCAATATCA GGTTTACCGG GCTGACTGGC TGCAAGACTG GGCCGCTGGC CGCCATCAAT TGCGCGACGT ACGAGGTCAG TCCAGACCAT TGTCAGCTGC CAATTGCTGG CAAGCCGAAC TGTGGCGCGC GTTGCTGGAC GACGTCGGGG CTGAAGGGAT GTCGCAGAGC CGTGCAGGCG TGCATCAGCG CTTCATCGAG CGCATCGGCA ACATGACCGA AGCGCCACCG GGCTTGCCGG CACGGGTCAT TGTTTTCGGC ATTTCGTCAC TGCCGGCACA AGCGCTCGAG GCGTTGGCAG GGCTGGCCAG ATTCAGTCAG GTTCTGCTCT GTGTGCACAA TCCGTGTCGT CACCACTGGA CCGATATCGT CGCCGACAAG GACCTGTTGC GTCACCAGTA CAAGCGTCAG GCGCGCAAGA GCGGCATGCC GATGGTCCTC GACCCGCAAG CGCTGCATCA GCATGCTCAT CCGTTGCTCG CGGCCTGGGG CAAGCAGGGA CGTGATTACA TCAACTTGCT GGACAGCCAC GACGACCCAC GCAGCTACCG TTCCTCGTTC AAGGACGAGC GCATTGACCT GTTCAGTGAG TCAGAGCCCA CCAACCTCCT GAACCAGCTG CAGGACGATA TCCTTGAGCT GCGTCCGCTG GATGAAACCC GTGAGCTGTG GCCGGCAGTC AATCCTTCTG AGGACCGCTC GATCCGCTTC CATGTGGCTC ACAGCGCGCA GCGCGAAGTA GAGGTGCTGC ATGACCAGCT ACTGGCGAGA TTCAGCAAAG ACCCTGGCCT GCGCCCGCGT GACGTGATTG TCATGGTCCC GGATATCGAC AGCTATGCCC CGCACATACG AGCAGTATTC GGGCAGATCG AGCGCGAAGA TCGTCGCTTC ATCCCCTTTA CGCTGGCTGA CCAGGGCCAG CGCGGCCGCG AGCCGTTGCT GATTGCTGTC GAGCACCTGC TCAAACTCCC GGACAGCCGT TTCCCGGTCA GCGAGATTCT CGACCTGCTG GACGTTCCAG CCTTGCGCGC ACGCTTCAGG ATTCAGGAGC GTGACCTGCC AACGCTGCAT CGCTGGATAG AAGGCGCAGG TATTCGTTGG GGCCTCAATG CTCAACAGCG TGCCGGTCTG GGGCTGCCGG ATGCCCTTGA GCAGAACAGC TGGCATTTCG GCCTGCGTCG CATGTTGCTG GGTTACGCCG TGGGTGCCGG CGCGGCTTAC GACGGCATCG AACCCTACGA TGAGATCGGC GGGCTTGATG CGGCGTTGAT CGGTCCGCTG GTCGCGTTGA TTGATGCTCT CCAGGTCGCC CACACAGAGT TGTCGACACC CACCACTCCG GAAGCATGGG GTGCTCGCCT GCAATCGCTG CTGCAGTTGT TCTTCCTCGC CGACAGCGAG CATGACGACT ACTTGCTTGC CCAGCTTGAA ACACTGCGCG AGAACTGGCT GGAAACCTGT GCAACGGTAA GACTGACCGA TGAGCTGCCG CTGACCGTTG TGCGTGAGGC CTGGCTGGCC GGGCTCGATC AAGGGCGCCT GTCCCAGCGT TTTCTGGCGG GCTCGGTCAA CTTCTGCACG CTGATGCCCA TGCGCGCCAT CCCGTTCAAA GTGGTCTGCC TGTTAGGCAT GAACGACGGC GATTACCCGC GTGCGCAACC GCCGCTGGAT TTCGATCTGA TGGGCAGCGA TTACCGACCC GGCGACCGCT CCCGGCGTGA AGACGATCGC TACCTGTTGC TGGAAGCCTT GCTCTCGGCC AGAGACCAGT TGTACGTCAG TTGGGTTGGC CATAGCATTC GTGACAACAG TGAGCGTCCA GCTTCGGTGC TCATCGGTCA GCTGCGCGAT CACCTCGCCA GTGGCTGGAA GCTGGCCGGC GAGACCGATC CGGACGGTAA ACACGATGAT CAGCGCTTGC TGAAAGCCCT GACTGTGAAT CACCCGTTGC AACCCTTCAG CGCCAATTAC TTCCACGCCG GCACAGGTTA TTTCAGCTTC GCCCGCGAGT GGCGCCTGCT GCATGAAACC GACCTTCAGG TGCCCGTGCC TCAAGCGCTG CCGGCTCATG AACAGGAAGA ACCGCTGTCC ATTGCGCAGT TACAGGATTT CCTGAGAAAC CCGGTAAAGC ACTTTTTCAG TCAGCGCCTG AAGATCTATT TCGAGGTGGC TGAAGCGCCG CTCGCCGATG AGGAACCGTT CGTGCTCGAT GCCCTTGAGC GTTACGGCCT CAGTGAAAGC CTGCTCAGCG CAGCGATGGT TTCCCCTGAC GATATGGATG CCGCCCTGAA AACCCAGGCG CTGAAACTGC AAGCCAGTGG ACTGCTGCCG CTCGCGGGCT TCGGCACCTT GATGCAGAGC GAGCTGATCG AGCCGCTGCC TGACGTACTC AGGCGCTACC ACGATCTGTT GACCCTCTGG CCCGAGACCC TGAGCAGCGC TTTACCGATC GGCTTCAGCC ATGCGGGTGT GAGCATCGAC GGCTGGCTGG GCGGGCTGCA CCGTAACGCC CGTGGCGAGC TGTTGCTGGT CACTGCAATT CCCAACAGCA TCGGCTCGAA AAAGACCCGC AAGTGGCACC GGCTGATTCG GCCGTGGGTC AATCACCTGG TGGCGTGCGC CTGCGACCTG CCGTTGAGCA CGGCACTGGT CGCCAGTGAT GAAACCCTGA TGCTGGAGCC GCTGGACAAG GCGAGTGCCG TCACCACGCT CAATCACTTG CTGACGGCCT GGCTGCACGG CATGCAAGAA CCCCTTCCGG TGGCGGTCAA AACCGCCTTC GCCTGGTTGG GCCAGCCTGC CGACAAAGCC GAAGCGGCTG CCCGCAAAGC CTACGAAGGT GACGGACAGA CTACCGATGG CGAGCGCCGC GAAAGCACGG CACTGGCTCG GCAGTTTCCC GACTTTGACG CACTGATCGA CAGTGAAGAA TTCGCAGGCT GGTGCGAGAC GCTCTACAAA CCGATTTACG ACGCGCCCTG GCAGTCGTTG TCCGGCGGGG AGGGCGGCGC ATGA
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Protein sequence | MSVTTSLSAG FMVVQGNRPD ELRSLVVSWM RRYPLAPLEN EIALVQSNGI AQWLKLALAE DAQDEDNGGC GIAAAIDVQL PGSFMWTLYR MVLGADEIPQ TSLLDKTPLT WRLMRLLPSL INQPHFEPLQ RFLTDDTDLR KRYQLSERLS DLFDQYQVYR ADWLQDWAAG RHQLRDVRGQ SRPLSAANCW QAELWRALLD DVGAEGMSQS RAGVHQRFIE RIGNMTEAPP GLPARVIVFG ISSLPAQALE ALAGLARFSQ VLLCVHNPCR HHWTDIVADK DLLRHQYKRQ ARKSGMPMVL DPQALHQHAH PLLAAWGKQG RDYINLLDSH DDPRSYRSSF KDERIDLFSE SEPTNLLNQL QDDILELRPL DETRELWPAV NPSEDRSIRF HVAHSAQREV EVLHDQLLAR FSKDPGLRPR DVIVMVPDID SYAPHIRAVF GQIEREDRRF IPFTLADQGQ RGREPLLIAV EHLLKLPDSR FPVSEILDLL DVPALRARFR IQERDLPTLH RWIEGAGIRW GLNAQQRAGL GLPDALEQNS WHFGLRRMLL GYAVGAGAAY DGIEPYDEIG GLDAALIGPL VALIDALQVA HTELSTPTTP EAWGARLQSL LQLFFLADSE HDDYLLAQLE TLRENWLETC ATVRLTDELP LTVVREAWLA GLDQGRLSQR FLAGSVNFCT LMPMRAIPFK VVCLLGMNDG DYPRAQPPLD FDLMGSDYRP GDRSRREDDR YLLLEALLSA RDQLYVSWVG HSIRDNSERP ASVLIGQLRD HLASGWKLAG ETDPDGKHDD QRLLKALTVN HPLQPFSANY FHAGTGYFSF AREWRLLHET DLQVPVPQAL PAHEQEEPLS IAQLQDFLRN PVKHFFSQRL KIYFEVAEAP LADEEPFVLD ALERYGLSES LLSAAMVSPD DMDAALKTQA LKLQASGLLP LAGFGTLMQS ELIEPLPDVL RRYHDLLTLW PETLSSALPI GFSHAGVSID GWLGGLHRNA RGELLLVTAI PNSIGSKKTR KWHRLIRPWV NHLVACACDL PLSTALVASD ETLMLEPLDK ASAVTTLNHL LTAWLHGMQE PLPVAVKTAF AWLGQPADKA EAAARKAYEG DGQTTDGERR ESTALARQFP DFDALIDSEE FAGWCETLYK PIYDAPWQSL SGGEGGA
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