Gene Psyr_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0673 
Symbol 
ID3366151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp762487 
End bp764040 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content63% 
IMG OID637651015 
ProductABC transporter 
Protein accessionYP_233781 
Protein GI66043940 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.918882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.379725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACC ACGCGATACC TGCGCGCCTG CAACTGCGCC ATATCACCAA ACGGTATCCC 
GGCTGCCTGG CCAACGACGC TGTCGACCTG ACGATTCAGC CCGGAGAGAT TCATGCCCTG
CTGGGTGAAA ACGGTGCGGG CAAAAGCACG CTGATGAAGA TCATCTACGG CGTGACGCAG
CCCGACGCCG GGACGATCAT CTGGCAAGGC CAGGCGCAGA CCATGCGCAA TCCGGCACAG
GCCAGAAGCC TGGGCATCGG CATGGTGTTC CAGCATTTTT CGCTGTTCGA AACCCTCAGC
GTCGCGCAAA ACATCGCGCT GGCGATGGGC GCAGCAGCAG GCACGCCCAA ACAACTGGAG
CCGCGCATCC GCGAGGTCTC ACAACGCTAC GGTATGGCGG TGGAACCCCA ACGACTGGTG
CACAGCCTGT CGATTGGCGA GCGGCAGAAA GTCGAGATCA TTCGCTGCCT GATGCAGGAC
ATTCGCCTGT TGATCCTCGA CGAACCGACG TCGGTGTTGA CGCCCCAGGA AGCCGAGGAG
CTGTTCGTGA CCCTTCGGCA TCTGGCCCGG GAAGGCTGCA GCATTCTGTT TATCAGTCAC
AAGCTGGGTG AGGTGCGCGC GCTGTGTCAC AGCGCAACCG TGCTGCGCAA CGGCAAGGTC
TCCGGGCACT GCATTCCCGC TGACTGCTCC GATCTGGAAC TGGCGCGCTT GATGGTCGGC
GATGCCGAAG GGCTGACCGC GCACTATGAA AAAGTCAGCG GCAGCACAGC CTTTTTGCGC
ATCGACAAGC TGTCCTGGCA CAACCCGGAC CCGTTCGGCT GCTCACTCAA AGACCTCAGC
CTGGAAGTAC GCAGCGGCGA AATCGTCGGT ATCGCAGGCG TGGCCGGTAA TGGTCAGGAT
GAATTGCTGG CGCTGCTCAG CGGCGAACAG ACCTTGCCGC ACGCCCAGGC GGCGACCCTG
CGTTTTGAGG ATGCCCCGGT CGGCAACCTG CGCCCCGATG CGCGGCGCAA GCGTGGCCTG
GCATTCGTCC CGGCCGAGCG TCTGGGACAT GGCGCAGTGC CGGAACTCAG TCTCGCCGAC
AACGCGCTGC TTACCGCCTT CCAGCAAGGG CTGGTGAGCA ATGGCCTGAT CCAGCGCAGC
AAGGTGCGCG CACTGGCCGA CGAAATCATT CGGCGCTTTG CAGTCAAGAC GCCGGATGCA
CAGGCCCCGG CGCGCAGTCT GTCGGGCGGC AACCTGCAGA AATTCATTCT TGGTCGGGAA
ATCCTGCAAA AGCCGAAACT GTTGATTGCC GCGCACCCCA CCTGGGGCGT GGATGTCGGC
GCGGCGGCGG CGATCCATCG GGCGCTGATT GCCTTACGCG ACGCGGGGGC CGCGATTCTG
GTGATCTCCG AAGACCTGGA CGAATTGTTC CAGATCAGCG ACCGACTCGC CGCCCTGAGC
GGCGGTCAGC TTTCCGAGCT GATCCCCACT GAACAGACCA GCACCGTGCA AATCGGCGGC
TGGATGGCGG GACAGTTCGA TCATTCTCAC AGCCAGGCCC ACGTGGCGGG TTAA
 
Protein sequence
MSNHAIPARL QLRHITKRYP GCLANDAVDL TIQPGEIHAL LGENGAGKST LMKIIYGVTQ 
PDAGTIIWQG QAQTMRNPAQ ARSLGIGMVF QHFSLFETLS VAQNIALAMG AAAGTPKQLE
PRIREVSQRY GMAVEPQRLV HSLSIGERQK VEIIRCLMQD IRLLILDEPT SVLTPQEAEE
LFVTLRHLAR EGCSILFISH KLGEVRALCH SATVLRNGKV SGHCIPADCS DLELARLMVG
DAEGLTAHYE KVSGSTAFLR IDKLSWHNPD PFGCSLKDLS LEVRSGEIVG IAGVAGNGQD
ELLALLSGEQ TLPHAQAATL RFEDAPVGNL RPDARRKRGL AFVPAERLGH GAVPELSLAD
NALLTAFQQG LVSNGLIQRS KVRALADEII RRFAVKTPDA QAPARSLSGG NLQKFILGRE
ILQKPKLLIA AHPTWGVDVG AAAAIHRALI ALRDAGAAIL VISEDLDELF QISDRLAALS
GGQLSELIPT EQTSTVQIGG WMAGQFDHSH SQAHVAG