Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0649 |
Symbol | |
ID | 3366127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 737097 |
End bp | 737900 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637650991 |
Product | helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation |
Protein accession | YP_233757 |
Protein GI | 66043916 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.323434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGTA ACGGACAGAT CAATCAGCGG CAGCTCACAG GCGAACGGCA GATACCGGCC TTGTCCGGCC TGCCGCGCCC GCTGTATGCC CGTGCCGAAA GTCTCAGCGC CGGTTCCTGG ACGCCGCCCC ATCGCCACGA CTGGGTGCAG TTTTCCTACG CGATCAGCGG GGTTCTGGGT GTGCATACCG CCGAGGGCAG TTTCTTTGCG CCGCCGCAGT GGGGCGTCTG GGTGCCTGCC GGGCTCGAGC ATGAGGTGGT GACCTCGATG CGCGCCGAAA TGCGCAGCCT GTACATTCGC ACGGCAGATT CGGGGTGGGC ACCGCAGCGC TGCAGGGTAC TGGAAGTCAC GCCACTGGCC CGCGAGCTGA TCAAGAGCTT CTGCCTGTTG CCCGTGGATT ATCCCGAGCA GGACAGCCAT GAGGCGCGGC TGGTGCAGGT GCTGCTGGAT CAACTGGCGC AACTGCCCGA AGTGGGTTTT TCACTGCCGT TGCCACGTCA TCCGCGTTTG CTGGGGCTGT GCAATGAGTT GATCGAAGAG CCGGGGCGCT TGATCACCCT GCACGACTGG GCCGCCCGCC TCGGGACCTC CGAGAAGACC CTGATGCGCC TGTTTCAGCG CGAAACCGGA TTGAGCTTTC GTGGCTGGCG GCAGCGGGCA CGGCTGCTGT CTTCGCTGTC TGCACTGGAA GAGGGCGCCA GTGTGACGCG GACCGCGCTG GCCTGCGGTT ATGACTCGAC GTCAGCGTTC ATCGCAGCCT TCAAGGGTTT GTTCGGCCAC ACCCCCGGTG ACTTGTTCAA GTAA
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Protein sequence | MPSNGQINQR QLTGERQIPA LSGLPRPLYA RAESLSAGSW TPPHRHDWVQ FSYAISGVLG VHTAEGSFFA PPQWGVWVPA GLEHEVVTSM RAEMRSLYIR TADSGWAPQR CRVLEVTPLA RELIKSFCLL PVDYPEQDSH EARLVQVLLD QLAQLPEVGF SLPLPRHPRL LGLCNELIEE PGRLITLHDW AARLGTSEKT LMRLFQRETG LSFRGWRQRA RLLSSLSALE EGASVTRTAL ACGYDSTSAF IAAFKGLFGH TPGDLFK
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