| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0648 |
|---|
| Symbol | |
|---|
| ID | 3366126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 735983 |
|---|
| End bp | 737011 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637650990 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | YP_233756 |
|---|
| Protein GI | 66043915 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0385] Predicted Na+-dependent transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAC TCAAACACTT CAAGCGCGTC GCCACTGACT GGTTCCTCTG GGGCATGGTG
CTGGCGACGG TACTCGCCTA TTTCTTCCCG CGTTTCGGGG CTACCGGCGG CAGCATGCAC
GCTGAGTACG TCATCAAGGT CGGCGTGTTC GTAGTGTTCT TTCTGCATGG CGTGAATCTG
TCCAGCGAGC AGATCAAGAA AGGCCTGACC AACTGGCGCT TGCACGTGAT GATCCAGGTC
TTCACCTTCG TGGTGTTCCC GCTGATCTGG CTGGCGTGCA ACAAGCTGCT GGGCTCGCAG
GTGCCAGCGC TGCTGATGCT GGGCTTCCTC TACCTGTGCG CCCTGCCCTC GACCATTTCC
TCCTCTGTGG CGCTGACCGG CAGCGCAGGC GGCAATGTCC CGGCAGCGAT TCTCAACGCC
AGCATGTCCA GTGTCATCGG GATTTTCATC ACCCCGTGGC TGGTGAGCCT GGTGGTCGGC
ACCGGCGCTG GCGGGATCGA TCTGGGCGAT ACGCTGCTCG ACCTGTGCGC CATGCTCCTG
CTGCCACTGG TGCTTGGCCA GTTAATGCGG CCGCTGCTGG GCAAGTTCTT CGCCCGTCAC
AAGAAATACA CCAACCTGAT CGACAAGCTG GTGATTCTGC TGCTGGTGTA TGCGGCGTTC
TGCAACTCGA TGATCTCCGG CATGTGGCAA AGCCAGGGCA ACAGCGTGAT CCTGACCGCG
TTCATCGGCA CCGCGCTGTT GCTGGCGGTG ATCCTGTTGA TGACCACCCG CACGGCGCGG
GTGCTCAAGT TCGATCATGC CGACAAGGTC GCGGCGGTGT TCTGCGCCAC CAAGAAGTCC
CTTGCTGCAG GCGCGCCGAT GGCTGCGCTG ATTTTCGGCA GCAATCCGGG GCTTGGCCTG
ATTCTGTTGC CGATCATGAT CTACCACCCG ATGCAGCTGA TCGTGTGCTC GATCATCGCC
GAGAGCTACG CCAGTCGTCA TCGCCAGCAG CTTTCGGCCG CCGCCCTGGA AGAAGCTCAA
GCCGCGTGA
|
|---|
| Protein sequence | MQSLKHFKRV ATDWFLWGMV LATVLAYFFP RFGATGGSMH AEYVIKVGVF VVFFLHGVNL
SSEQIKKGLT NWRLHVMIQV FTFVVFPLIW LACNKLLGSQ VPALLMLGFL YLCALPSTIS
SSVALTGSAG GNVPAAILNA SMSSVIGIFI TPWLVSLVVG TGAGGIDLGD TLLDLCAMLL
LPLVLGQLMR PLLGKFFARH KKYTNLIDKL VILLLVYAAF CNSMISGMWQ SQGNSVILTA
FIGTALLLAV ILLMTTRTAR VLKFDHADKV AAVFCATKKS LAAGAPMAAL IFGSNPGLGL
ILLPIMIYHP MQLIVCSIIA ESYASRHRQQ LSAAALEEAQ AA
|
|---|
| |