Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0645 |
Symbol | |
ID | 3366123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 732804 |
End bp | 734081 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650987 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_233753 |
Protein GI | 66043912 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCATC CTCGTCGGGT CGCCATCGTC GGCGGTAACC GCATTCCGTT CGCGCGCTCC AATGGCCCTT ATGCCAAGGC CAGCAATCAG GACATGCTCA CGGCTGCTCT GGAAGGGCTG ATCGAGCGCT TCAATCTGCA TGGGCTGCGC ATGGGCGAGG TGGTGACGGG CGCGGTGCTC AAGCACTCCA GAGACTTCAA CCTGACCCGC GAATGCGTGC TCGGCTCGCG GCTCTCGGCA CAGACCCCGG CTTACGACAT TCAGCAAGCG TGCGGTACGG GGCTGGAAGC GGCGTTGCTG GTGGCCAACA AGATCGCTCT GGGGCAGATC GAGTGCGGCA TTGCCGGTGG CGTGGACACC ACGTCCGATG CCCCGATCGG CGTCAACGAG GGGCTGCGCA AGATCCTGCT GCAGGTAAAC CGCAGCAAGA CGCCCGGTGA CAAGCTCAAG GCTCTGATGC AGTTGCGTCC ACACCACCTC AAACCGGAGC TGCCGCGTAA CGGCGAGCCA CGCACGCGCT TGTCGATGGG CCAGCATTGC GAGCTGATGG CGCAGACCTG GGGCATAGAG CGCGGGCCGC AGGATCAACT GGCGCTCGAG AGCCATCTGA AAATGGCCGC GGCCTACGCC GAGGGCTGGC AGGATGATTT GATGACGCCG TATCTGGGGC TGATCCGTGA CAACAACCTG CGTCCGGACC TGACGATTGA AAAGCTGGCC AGCCTCAAGC CCGCGTTCGA GCGCAGCGCC AAGGGCACCT TGTCGGCGGG CAATTCGACA CCGCTGACCG ATGGCGCATC GGTGGTGTTG CTGGCCAGCG AGGAGTGGGC TCGCGAGCGG GGCCTGCCGG TGCTGGCCTA CTGGCGCGAC GGCGAGGCCG CAGCGGTGGA TTTCGTCAAC GGTGCAGAAG GGCTGCTGAT GGCGCCGGTC TACGCCGTTC CGCGTCTGCT GGCCCGCAAT GGCCTGACCC TTCAGGACTT CGATTACTAC GAAATCCATG AAGCCTTCGC CGCGCAGGTG CTGTGTACCC TCAAGGCCTG GGAAGACGCC GACTACTGCA AGACCCGCCT AGGGCTGGAC GCGCCGCTGG GGTCGATTGA TCGCAGCAAA CTGAACGTCA AGGGCAGCTC ACTGGCTGCC GGCCACCCGT TCGCCGCGAC CGGAGGCCGC ATCGTCGCCA ATCTGGCCAA GCTGCTGGAT GCGGCAGGCA GCGGACGTGG ATTGATTTCC ATCTGTGCCG CAGGCGGCCA GGGCGTGACG GCGATTCTGG AGCGTTAG
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Protein sequence | MTHPRRVAIV GGNRIPFARS NGPYAKASNQ DMLTAALEGL IERFNLHGLR MGEVVTGAVL KHSRDFNLTR ECVLGSRLSA QTPAYDIQQA CGTGLEAALL VANKIALGQI ECGIAGGVDT TSDAPIGVNE GLRKILLQVN RSKTPGDKLK ALMQLRPHHL KPELPRNGEP RTRLSMGQHC ELMAQTWGIE RGPQDQLALE SHLKMAAAYA EGWQDDLMTP YLGLIRDNNL RPDLTIEKLA SLKPAFERSA KGTLSAGNST PLTDGASVVL LASEEWARER GLPVLAYWRD GEAAAVDFVN GAEGLLMAPV YAVPRLLARN GLTLQDFDYY EIHEAFAAQV LCTLKAWEDA DYCKTRLGLD APLGSIDRSK LNVKGSSLAA GHPFAATGGR IVANLAKLLD AAGSGRGLIS ICAAGGQGVT AILER
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