Gene Psyr_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0645 
Symbol 
ID3366123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp732804 
End bp734081 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content65% 
IMG OID637650987 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_233753 
Protein GI66043912 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATC CTCGTCGGGT CGCCATCGTC GGCGGTAACC GCATTCCGTT CGCGCGCTCC 
AATGGCCCTT ATGCCAAGGC CAGCAATCAG GACATGCTCA CGGCTGCTCT GGAAGGGCTG
ATCGAGCGCT TCAATCTGCA TGGGCTGCGC ATGGGCGAGG TGGTGACGGG CGCGGTGCTC
AAGCACTCCA GAGACTTCAA CCTGACCCGC GAATGCGTGC TCGGCTCGCG GCTCTCGGCA
CAGACCCCGG CTTACGACAT TCAGCAAGCG TGCGGTACGG GGCTGGAAGC GGCGTTGCTG
GTGGCCAACA AGATCGCTCT GGGGCAGATC GAGTGCGGCA TTGCCGGTGG CGTGGACACC
ACGTCCGATG CCCCGATCGG CGTCAACGAG GGGCTGCGCA AGATCCTGCT GCAGGTAAAC
CGCAGCAAGA CGCCCGGTGA CAAGCTCAAG GCTCTGATGC AGTTGCGTCC ACACCACCTC
AAACCGGAGC TGCCGCGTAA CGGCGAGCCA CGCACGCGCT TGTCGATGGG CCAGCATTGC
GAGCTGATGG CGCAGACCTG GGGCATAGAG CGCGGGCCGC AGGATCAACT GGCGCTCGAG
AGCCATCTGA AAATGGCCGC GGCCTACGCC GAGGGCTGGC AGGATGATTT GATGACGCCG
TATCTGGGGC TGATCCGTGA CAACAACCTG CGTCCGGACC TGACGATTGA AAAGCTGGCC
AGCCTCAAGC CCGCGTTCGA GCGCAGCGCC AAGGGCACCT TGTCGGCGGG CAATTCGACA
CCGCTGACCG ATGGCGCATC GGTGGTGTTG CTGGCCAGCG AGGAGTGGGC TCGCGAGCGG
GGCCTGCCGG TGCTGGCCTA CTGGCGCGAC GGCGAGGCCG CAGCGGTGGA TTTCGTCAAC
GGTGCAGAAG GGCTGCTGAT GGCGCCGGTC TACGCCGTTC CGCGTCTGCT GGCCCGCAAT
GGCCTGACCC TTCAGGACTT CGATTACTAC GAAATCCATG AAGCCTTCGC CGCGCAGGTG
CTGTGTACCC TCAAGGCCTG GGAAGACGCC GACTACTGCA AGACCCGCCT AGGGCTGGAC
GCGCCGCTGG GGTCGATTGA TCGCAGCAAA CTGAACGTCA AGGGCAGCTC ACTGGCTGCC
GGCCACCCGT TCGCCGCGAC CGGAGGCCGC ATCGTCGCCA ATCTGGCCAA GCTGCTGGAT
GCGGCAGGCA GCGGACGTGG ATTGATTTCC ATCTGTGCCG CAGGCGGCCA GGGCGTGACG
GCGATTCTGG AGCGTTAG
 
Protein sequence
MTHPRRVAIV GGNRIPFARS NGPYAKASNQ DMLTAALEGL IERFNLHGLR MGEVVTGAVL 
KHSRDFNLTR ECVLGSRLSA QTPAYDIQQA CGTGLEAALL VANKIALGQI ECGIAGGVDT
TSDAPIGVNE GLRKILLQVN RSKTPGDKLK ALMQLRPHHL KPELPRNGEP RTRLSMGQHC
ELMAQTWGIE RGPQDQLALE SHLKMAAAYA EGWQDDLMTP YLGLIRDNNL RPDLTIEKLA
SLKPAFERSA KGTLSAGNST PLTDGASVVL LASEEWARER GLPVLAYWRD GEAAAVDFVN
GAEGLLMAPV YAVPRLLARN GLTLQDFDYY EIHEAFAAQV LCTLKAWEDA DYCKTRLGLD
APLGSIDRSK LNVKGSSLAA GHPFAATGGR IVANLAKLLD AAGSGRGLIS ICAAGGQGVT
AILER