Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0637 |
Symbol | |
ID | 3366115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 726631 |
End bp | 727347 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650979 |
Product | LrgB-like protein |
Protein accession | YP_233745 |
Protein GI | 66043904 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0793077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTG ACTGGCACGG TGCATGGCTG TCGGTGATTC ATCACCCGCT TTTCGGCATC GCGATCACCC TGAGTGCCTA CCAATTGGCG ATGGCCGCCT ATGAAAGAAC CCGCTGGCTT TTTCTGCAGC CTGTGCTGGT CTCGATGGTG GTGGTGATCG GGATCGTGCT GTTCTGCGAC CTTGAATACA CCGAGTACCG CAAAAGCACC GAGATTCTGG GCACGCTGCT GGGGCCTGCA ACCGTTGCGC TGGCGGTCCC GCTCTATTTG AATATGCGAC GGATCCGCCA GTTGTTCTGG CCGGTCTTGA CTACGCTGGT AATCGGCGGG GTGTTTGCCA CCGGTTTGTG CGTGGGGTTC GGGGTGCTGT TCGGTGCCGA CCACATGATT CTGATGACCA TGGCGCCCAA ATCAGTGACA TCGCCCATCG CCATGCTGGT CGCCGAGCAG ATCGGCGGGG TTGCCGCCCT GGCGGCTGTT TTTGTGTTGA TTACTGGCGT ATTCGGTGCC ATTTTCGGCC CCGGTCTGCT GTCACTGATC GGGGTGGACA ATCCTGCTGC CCGAGGCATG GCGCTGGGGC TTACCGCGCA TGCGGTAGGC ACATCCGTGG CATTGCAGGA GGGGGAAGAA ACGGGGGCTT TTGCTGCGTT GGCAATGAGT CTGATGGGCG TTGCGACGGC GTTGTTCCTG CCGCTGGCAA TGTCGCTGGC CATTTAA
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Protein sequence | MSLDWHGAWL SVIHHPLFGI AITLSAYQLA MAAYERTRWL FLQPVLVSMV VVIGIVLFCD LEYTEYRKST EILGTLLGPA TVALAVPLYL NMRRIRQLFW PVLTTLVIGG VFATGLCVGF GVLFGADHMI LMTMAPKSVT SPIAMLVAEQ IGGVAALAAV FVLITGVFGA IFGPGLLSLI GVDNPAARGM ALGLTAHAVG TSVALQEGEE TGAFAALAMS LMGVATALFL PLAMSLAI
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