Gene Psyr_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0637 
Symbol 
ID3366115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp726631 
End bp727347 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID637650979 
ProductLrgB-like protein 
Protein accessionYP_233745 
Protein GI66043904 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0793077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTG ACTGGCACGG TGCATGGCTG TCGGTGATTC ATCACCCGCT TTTCGGCATC 
GCGATCACCC TGAGTGCCTA CCAATTGGCG ATGGCCGCCT ATGAAAGAAC CCGCTGGCTT
TTTCTGCAGC CTGTGCTGGT CTCGATGGTG GTGGTGATCG GGATCGTGCT GTTCTGCGAC
CTTGAATACA CCGAGTACCG CAAAAGCACC GAGATTCTGG GCACGCTGCT GGGGCCTGCA
ACCGTTGCGC TGGCGGTCCC GCTCTATTTG AATATGCGAC GGATCCGCCA GTTGTTCTGG
CCGGTCTTGA CTACGCTGGT AATCGGCGGG GTGTTTGCCA CCGGTTTGTG CGTGGGGTTC
GGGGTGCTGT TCGGTGCCGA CCACATGATT CTGATGACCA TGGCGCCCAA ATCAGTGACA
TCGCCCATCG CCATGCTGGT CGCCGAGCAG ATCGGCGGGG TTGCCGCCCT GGCGGCTGTT
TTTGTGTTGA TTACTGGCGT ATTCGGTGCC ATTTTCGGCC CCGGTCTGCT GTCACTGATC
GGGGTGGACA ATCCTGCTGC CCGAGGCATG GCGCTGGGGC TTACCGCGCA TGCGGTAGGC
ACATCCGTGG CATTGCAGGA GGGGGAAGAA ACGGGGGCTT TTGCTGCGTT GGCAATGAGT
CTGATGGGCG TTGCGACGGC GTTGTTCCTG CCGCTGGCAA TGTCGCTGGC CATTTAA
 
Protein sequence
MSLDWHGAWL SVIHHPLFGI AITLSAYQLA MAAYERTRWL FLQPVLVSMV VVIGIVLFCD 
LEYTEYRKST EILGTLLGPA TVALAVPLYL NMRRIRQLFW PVLTTLVIGG VFATGLCVGF
GVLFGADHMI LMTMAPKSVT SPIAMLVAEQ IGGVAALAAV FVLITGVFGA IFGPGLLSLI
GVDNPAARGM ALGLTAHAVG TSVALQEGEE TGAFAALAMS LMGVATALFL PLAMSLAI