Gene Psyr_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0623 
Symbol 
ID3366101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp712693 
End bp713424 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content59% 
IMG OID637650965 
Productpeptidase S24, S26A and S26B 
Protein accessionYP_233731 
Protein GI66043890 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.471102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT CAGGTGATCG ACTCCGCATC CTCCTTCGGG AGTGCCATCT CACAGCGACT 
GATTTTGCCG CCAACCGCAA AATCACGCCG CAACACGTCA ATAACTGGTT CAAGCGCGGC
GTGCCCATGG CGCGGATTGA CGAGGTGGCT GAACTGTTGA CCGTCAACGC CCGCTGGCTG
CGCACCGGCG AAGGCCCCAA ACACCCTAAC GAATGCGCCA ATGAAAACAC CGCCGGCGAT
ACTCGCGTCA TCATTCATCA GGCCAGAAAC GTGTCGCGCG GCGATGTGGA AATCCAGATT
TTCATGGAAG CCGAATCCAC CCACGGCGTC GGCAAGACCG TCCTCGCCGA AGCCCTCGGA
CAGAAAATTC GCCTGCCCCT GCAAGTCCTG CAGAACATGG GCATCGACCC GAAAAACTGC
ATGTGTGTGG CCATGGTCGG TAACAGCATG GCCGACAAGA TTCAGGACGG CTCGATCCTC
GGCGTCGACC GCGAGCTGAC TCAGGTCATC GACGGCGAAA TCTACGCCCT CGAACACGGC
GGCATCCTGC GCGTCCGCTA CCTCTACCGC CTGCCCAACG GCGGCCTGCG CCTGCGCAGC
CACAACGACG CCGAATACCC GGACGAACTG TTCAGCGCCG AAGACATTGA CCGGGAGAAA
ATACGGATTC TGGGCTGGAT ATTCTGGTGG TCGACCCTGA ACAGCCGACG CAATGCCATG
CTGCTGTTAT GA
 
Protein sequence
MNTSGDRLRI LLRECHLTAT DFAANRKITP QHVNNWFKRG VPMARIDEVA ELLTVNARWL 
RTGEGPKHPN ECANENTAGD TRVIIHQARN VSRGDVEIQI FMEAESTHGV GKTVLAEALG
QKIRLPLQVL QNMGIDPKNC MCVAMVGNSM ADKIQDGSIL GVDRELTQVI DGEIYALEHG
GILRVRYLYR LPNGGLRLRS HNDAEYPDEL FSAEDIDREK IRILGWIFWW STLNSRRNAM
LLL