Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0610 |
Symbol | |
ID | 3366088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 700534 |
End bp | 701310 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637650952 |
Product | hypothetical protein |
Protein accession | YP_233718 |
Protein GI | 66043877 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.421452 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTCTT TTTGCAGCCC TGGCGTGATG AAGTGGCGCG ACCTGATCAT TAATCTTGTC ATCAAGGAAA TAAAAATCCG CTACATGGGC GCAACATTGG GCTTTATCTG GTCATTGGGC AATCCGCTGG TTGTCACGCT CACGTATTAC ACGGTGTTCA CGTATATTCT GCCCAGTAGT CAGGACCGCT TTGCGCTGCA CCTGGTGACA GGTATCGTCC ACTGGATGCT TCTGGCACAA ATTGTTTCGC AAAGCGGAGA GTGGCTGATC AATAACGGCA ACCTCATTCG AAAGTTGCGG TTTCCCCGTC TGTTGCTACC CATTTCCGGG GCGCTGGCAA TCGTTGTTTT CTGGGCCGGC TGCATGCTCG TCTATTCATC ATTATTTGCC GTGCTCGGCG GCATCTTTTC GCGTGCGCTG TTGTTTTATC CGATTGTGCT GATCGCGTTC ATGGCTTTGA TCATGGGCGT TGGTCTGGCA CTCAGTGTCA TCCAGGTCAC CGTACGGGAT GCCAAGCACT TCATCGACGT GTTTCTACCC TTGTTGTTCT GGCTCACGCC CATTGTATGG GTGAGCTCAT CGCTGCCCGT CGGTATCGCC AACATTGCGG CCTATAACCC GATAGGTCTG TACTTCAACA GCTTTACCAG CATTCTGCAT GCCGGAGTCG TTCCAGAGCC CCGTGATCTG CTGCTGTGCG TGTTCATGGG CGCCGCGTCG CTGCTGGTGG GGTTGTTCAT GTTCAGGAAG GTGGACAGCG TGGTGGAGTA TTTATGA
|
Protein sequence | MPSFCSPGVM KWRDLIINLV IKEIKIRYMG ATLGFIWSLG NPLVVTLTYY TVFTYILPSS QDRFALHLVT GIVHWMLLAQ IVSQSGEWLI NNGNLIRKLR FPRLLLPISG ALAIVVFWAG CMLVYSSLFA VLGGIFSRAL LFYPIVLIAF MALIMGVGLA LSVIQVTVRD AKHFIDVFLP LLFWLTPIVW VSSSLPVGIA NIAAYNPIGL YFNSFTSILH AGVVPEPRDL LLCVFMGAAS LLVGLFMFRK VDSVVEYL
|
| |