Gene Psyr_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0610 
Symbol 
ID3366088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp700534 
End bp701310 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content53% 
IMG OID637650952 
Producthypothetical protein 
Protein accessionYP_233718 
Protein GI66043877 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.421452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTT TTTGCAGCCC TGGCGTGATG AAGTGGCGCG ACCTGATCAT TAATCTTGTC 
ATCAAGGAAA TAAAAATCCG CTACATGGGC GCAACATTGG GCTTTATCTG GTCATTGGGC
AATCCGCTGG TTGTCACGCT CACGTATTAC ACGGTGTTCA CGTATATTCT GCCCAGTAGT
CAGGACCGCT TTGCGCTGCA CCTGGTGACA GGTATCGTCC ACTGGATGCT TCTGGCACAA
ATTGTTTCGC AAAGCGGAGA GTGGCTGATC AATAACGGCA ACCTCATTCG AAAGTTGCGG
TTTCCCCGTC TGTTGCTACC CATTTCCGGG GCGCTGGCAA TCGTTGTTTT CTGGGCCGGC
TGCATGCTCG TCTATTCATC ATTATTTGCC GTGCTCGGCG GCATCTTTTC GCGTGCGCTG
TTGTTTTATC CGATTGTGCT GATCGCGTTC ATGGCTTTGA TCATGGGCGT TGGTCTGGCA
CTCAGTGTCA TCCAGGTCAC CGTACGGGAT GCCAAGCACT TCATCGACGT GTTTCTACCC
TTGTTGTTCT GGCTCACGCC CATTGTATGG GTGAGCTCAT CGCTGCCCGT CGGTATCGCC
AACATTGCGG CCTATAACCC GATAGGTCTG TACTTCAACA GCTTTACCAG CATTCTGCAT
GCCGGAGTCG TTCCAGAGCC CCGTGATCTG CTGCTGTGCG TGTTCATGGG CGCCGCGTCG
CTGCTGGTGG GGTTGTTCAT GTTCAGGAAG GTGGACAGCG TGGTGGAGTA TTTATGA
 
Protein sequence
MPSFCSPGVM KWRDLIINLV IKEIKIRYMG ATLGFIWSLG NPLVVTLTYY TVFTYILPSS 
QDRFALHLVT GIVHWMLLAQ IVSQSGEWLI NNGNLIRKLR FPRLLLPISG ALAIVVFWAG
CMLVYSSLFA VLGGIFSRAL LFYPIVLIAF MALIMGVGLA LSVIQVTVRD AKHFIDVFLP
LLFWLTPIVW VSSSLPVGIA NIAAYNPIGL YFNSFTSILH AGVVPEPRDL LLCVFMGAAS
LLVGLFMFRK VDSVVEYL