Gene Psyr_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0606 
Symbol 
ID3366084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp696563 
End bp696808 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content62% 
IMG OID637650948 
Productexodeoxyribonuclease VII small subunit 
Protein accessionYP_233714 
Protein GI66043873 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.60315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0881534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA AGAAAGCTGC ACTGGATTTC GAACAGTCAC TCGCTGATCT GCAAGCGCTG 
GTAGAGCGGC TGGAGAATGG CGAGTTGTCG CTGGAAGACT CCCTGACCGC CTTCGAGCAA
GGTGTACGCC TGACCCGCGA CTGCCAGAGC GCCCTCACCC AGGCCGAGCA GAAGGTTCAG
GTGCTGCTGG AGCGCGATGG CGAGCTGAGC GAAGAGCCGT TCGACGATGC GGAACTCCCC
GAATGA
 
Protein sequence
MARKKAALDF EQSLADLQAL VERLENGELS LEDSLTAFEQ GVRLTRDCQS ALTQAEQKVQ 
VLLERDGELS EEPFDDAELP E