Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0602 |
Symbol | |
ID | 3366080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 691538 |
End bp | 692302 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650944 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_233710 |
Protein GI | 66043869 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0114024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.546802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCA CTGTATTCAT CACGGGCGCC ACTTCCGGTT TTGGCGAGGC GTGTGCCCGT CGTTTCGCCG AGGCGGGCTG GTCGCTGGTG CTGACCGGTC GACGCAAGGA CCGCCTGGAT ACCTTGAGCG CCGAGCTGTC GAAGCAGACC AAGGTGCATA CGCTGGTGCT GGATGTACGT GACCGCAAGG CGATGGAGAG CGCCATCGCA GGTTTGCCTG AAGAGTTCGG CAGCATTCGC GGGCTGATCA ACAATGCCGG TCTGGCGCTG GGAATCGATC CTGCGCCCAA GTGCGATCTG GATGACTGGG ACACCATGAT CGACACCAAC GTCAAAGGTC TGGTGTACAC CACGCGTCTG CTGCTGCCGC GTCTGATCGC GCACGGTCGC GGCGCGAGCA TCGTCAACCT GGGTTCGGTC GCCGGTAACT ACCCGTATCT GGGCGGCAAC GTCTACGGTG GCACCAAGGC CTTTGTCGGG CAGTTCTCGC TGAACCTGCG CAACGACCTG ATCGGCACCG GCGTGCGCGT CACCAACCTT GAGCCGGGGC TGTGCGAGAG CGAGTTTTCG CTGGTGCGTT TCGGCGGTGA TCAGGCCAAG TACGACGCCA CCTACGCAGG TGCCGAGCCG ATTCAGCCTC AGGACATCGC CGACACCATC TTCTGGATCA TGAACACACC CGCGCACGTC AACATCAACA GCCTGGAACT GATGCCTGTC AGCCAGACCT GGGCCGGCTT TGCGATTGAT CGCAACCGCG GTTGA
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Protein sequence | MTSTVFITGA TSGFGEACAR RFAEAGWSLV LTGRRKDRLD TLSAELSKQT KVHTLVLDVR DRKAMESAIA GLPEEFGSIR GLINNAGLAL GIDPAPKCDL DDWDTMIDTN VKGLVYTTRL LLPRLIAHGR GASIVNLGSV AGNYPYLGGN VYGGTKAFVG QFSLNLRNDL IGTGVRVTNL EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIADTI FWIMNTPAHV NINSLELMPV SQTWAGFAID RNRG
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