Gene Psyr_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0602 
Symbol 
ID3366080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp691538 
End bp692302 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID637650944 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_233710 
Protein GI66043869 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0114024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.546802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA CTGTATTCAT CACGGGCGCC ACTTCCGGTT TTGGCGAGGC GTGTGCCCGT 
CGTTTCGCCG AGGCGGGCTG GTCGCTGGTG CTGACCGGTC GACGCAAGGA CCGCCTGGAT
ACCTTGAGCG CCGAGCTGTC GAAGCAGACC AAGGTGCATA CGCTGGTGCT GGATGTACGT
GACCGCAAGG CGATGGAGAG CGCCATCGCA GGTTTGCCTG AAGAGTTCGG CAGCATTCGC
GGGCTGATCA ACAATGCCGG TCTGGCGCTG GGAATCGATC CTGCGCCCAA GTGCGATCTG
GATGACTGGG ACACCATGAT CGACACCAAC GTCAAAGGTC TGGTGTACAC CACGCGTCTG
CTGCTGCCGC GTCTGATCGC GCACGGTCGC GGCGCGAGCA TCGTCAACCT GGGTTCGGTC
GCCGGTAACT ACCCGTATCT GGGCGGCAAC GTCTACGGTG GCACCAAGGC CTTTGTCGGG
CAGTTCTCGC TGAACCTGCG CAACGACCTG ATCGGCACCG GCGTGCGCGT CACCAACCTT
GAGCCGGGGC TGTGCGAGAG CGAGTTTTCG CTGGTGCGTT TCGGCGGTGA TCAGGCCAAG
TACGACGCCA CCTACGCAGG TGCCGAGCCG ATTCAGCCTC AGGACATCGC CGACACCATC
TTCTGGATCA TGAACACACC CGCGCACGTC AACATCAACA GCCTGGAACT GATGCCTGTC
AGCCAGACCT GGGCCGGCTT TGCGATTGAT CGCAACCGCG GTTGA
 
Protein sequence
MTSTVFITGA TSGFGEACAR RFAEAGWSLV LTGRRKDRLD TLSAELSKQT KVHTLVLDVR 
DRKAMESAIA GLPEEFGSIR GLINNAGLAL GIDPAPKCDL DDWDTMIDTN VKGLVYTTRL
LLPRLIAHGR GASIVNLGSV AGNYPYLGGN VYGGTKAFVG QFSLNLRNDL IGTGVRVTNL
EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIADTI FWIMNTPAHV NINSLELMPV
SQTWAGFAID RNRG