Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0601 |
Symbol | |
ID | 3366079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 690101 |
End bp | 690817 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637650943 |
Product | ABC transporter |
Protein accession | YP_233709 |
Protein GI | 66043868 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.190896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.541783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAGC CGATCCTCGA ACTGAAAGAG ATCGATGTGT TTTACGGGCC GATTCAGGCC CTGAAGAAAG TCTCGCTGCA CATCAATGAG GGTGAAACGG TGAGCCTGAT CGGCTCCAAC GGCGCGGGCA AGTCCACGCT GCTGATGTCG ATCTTCGGTC AGCCGCGCGC GGCCAGCGGG CAGATCATCT ATCAGGGCAC CGACATCACC CAGAAGTCCT CGCATTACAT CGCCTCCAAC GGCATTGCGC AGTCGCCGGA GGGACGGCGG GTCTTTCCCG ACATGTCGGT CGAAGAAAAC CTGATGATGG GCACCATTCC GATTGGCGAC AAGCATTCGG CCGAAGACAT GCAGCGCATG TTCGAGCTGT TCCCCAGGCT CAAGGAGCGC CGCAATCAGC GCGCCATGAC CATGTCCGGA GGCGAGCAGC AAATGCTCGC CATCGCCCGT GCGCTGATGA GTCGTCCGAA ATTGCTGCTG CTCGATGAGC CAAGCCTGGG TCTGGCCCCG ATCATCGTCA AACAGATCTT CTCGACCCTG CGTGAACTGG CAGCCACGGG CATGACGATA TTTCTGGTCG AGCAGAACGC CAACCATGCG CTCAAGCTGT CCGACCGGGC CTATGTCATG GTCAATGGCG AGATTCGCCT GTCCGGCACG GGGCAGGAAT TGCTGGTAAA TGAAGAGGTA AGGAACGCTT ATCTGGGCGG GCACTGA
|
Protein sequence | MSKPILELKE IDVFYGPIQA LKKVSLHINE GETVSLIGSN GAGKSTLLMS IFGQPRAASG QIIYQGTDIT QKSSHYIASN GIAQSPEGRR VFPDMSVEEN LMMGTIPIGD KHSAEDMQRM FELFPRLKER RNQRAMTMSG GEQQMLAIAR ALMSRPKLLL LDEPSLGLAP IIVKQIFSTL RELAATGMTI FLVEQNANHA LKLSDRAYVM VNGEIRLSGT GQELLVNEEV RNAYLGGH
|
| |