| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0600 |
|---|
| Symbol | |
|---|
| ID | 3366078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 689229 |
|---|
| End bp | 690104 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637650942 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_233708 |
|---|
| Protein GI | 66043867 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.626687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.53595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG AAGTGATTCT CTCCGTCGAG CACCTGATGA TGCACTTTGG CGGCATCAAG
GCCCTCAGCG ACGTCAGCCT CAAGGTCCGG CGCAATTCGA TTTTCGCCCT GATCGGCCCC
AACGGTGCGG GCAAGACCAC GGTCTTCAAC TGCCTGACCG GTTTCTACAA GGCCACTGGC
GGACGCATCG AACTGCACAC TCGTGGCAAG ACCACCAATG TGATCAAGCT ATTGGGCGAG
CCGTTCCAGG CGACCGACTT CGTGTCGCCG AAAAGCTTCC TCAGCCGGGT GTACTACAAG
ATGTTCGGCG GCACCCATCT GGTCAACAGG GCAGGGCTGG CGCGCACGTT CCAGAACATT
CGCCTGTTCA AGGAAATGTC GGTCGTCGAA AACCTGCTGG TCGCCCAGCA CATGTGGGTC
AACCGCAGCC TGATCAGCGG GATCCTGAAT ACCAGGGGCT ATCGCAAGGC CGAAGAGGAT
GCGCTGAACA CCGCGTTCTA CTGGCTGGAG GTGGTCGATC TGGTGGACTG CGCCAACCGT
CTGGCTGGCG AGTTGTCCTA CGGGCAGCAG CGCCGTCTGG AGATTGCGCG AGCCATGTGC
ACGCGGCCGC AGGTGATCTG CCTGGATGAG CCGGCTGCCG GTCTCAACCC GCAGGAAACC
GAGGCACTCA GCGGCATGAT CCGCCTGCTG CGTGACGAGC ACGACATGAC CATTGTGCTG
ATCGAGCACG ACATGGGCAT GGTCATGGGG ATTTCCGACG ATATTGTGGT GCTCGACCAT
GGCAACGTGA TTGCGATGGG CGGGCCGGAA CAGATCCGTA ATGATCCGAA GGTGATCGCT
GCGTATCTGG GCGCTGATGA AGAGGAGCTG GTATGA
|
|---|
| Protein sequence | MSTEVILSVE HLMMHFGGIK ALSDVSLKVR RNSIFALIGP NGAGKTTVFN CLTGFYKATG
GRIELHTRGK TTNVIKLLGE PFQATDFVSP KSFLSRVYYK MFGGTHLVNR AGLARTFQNI
RLFKEMSVVE NLLVAQHMWV NRSLISGILN TRGYRKAEED ALNTAFYWLE VVDLVDCANR
LAGELSYGQQ RRLEIARAMC TRPQVICLDE PAAGLNPQET EALSGMIRLL RDEHDMTIVL
IEHDMGMVMG ISDDIVVLDH GNVIAMGGPE QIRNDPKVIA AYLGADEEEL V
|
|---|
| |