Gene Psyr_0599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0599 
Symbol 
ID3366077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp687919 
End bp689232 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content61% 
IMG OID637650941 
Productinner-membrane translocator 
Protein accessionYP_233707 
Protein GI66043866 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.512727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.577839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC CTGTTGCTGT TCCTGTTTCC AAACCTGTCG AAATCAAGAA GAGTCTGATC 
GATGCCGTAG TCGCCGGGTT GCTGGCGCTG ATCGTATTCG GCCCCATTGT CGGGATCGTG
CTCGATGGCT ACAGCTTCAA CCTGCAACCG ACGCGCGTGG CCTGGCTGGT GGGCGTGGTC
ATGATCGGTC GCTTTCTGAT CAGTCTGTTT CTGCAAACAC CCAGAGGCCT GCGTGTTTCC
CAGAGCTTCG AAAGCTCCGA CTCCGGCGTG CATGTGCTCA AACCGGATCA TCGATCAAGC
CTGTACTGGA TCATTCCGCT GCTGATCGTG ATTGCCATCG TGTTCCCGAT CTTCGCCAAC
AAGTACATTC TGACCGTGGT CATCCTCGGT CTGATCTACG TGCTGCTGGG CCTGGGGCTG
AACATCGTGG TCGGTCTGGC GGGGCTGCTC GACCTTGGCT ACGTGGCGTT TTACGCCATC
GGTGCTTATG GTCTGGCGCT GGGCTATCAG TATCTGGGCC TGGGCTTCTG GTCGGCCTTG
CCGCTGGCGG CGATCGCGGC GGCGCTGGCC GGGTGCATTC TCGGCTTCCC GGTGTTGCGC
ATGCATGGCG ACTATCTGGC CATCGTGACG CTAGGGTTCG GCGAGATCAT TCGCCTTGTG
TTGAATAACT GGCTGTCGTT CACCGGCGGC CCGAACGGTG TGCCGGTGCC GGCGCCCACC
TTCCTCGGGC TGGAGTTTGG CCGACGCGCC AAGGACGGCG GGGTGCCGAT CCATGAATAT
TTCGGCTTCG ATTACAACCC GGACCTGAAA TTCATCTTCA TCTACACCGT GCTGTTCCTG
GTCGTGCTGG CGGTGCTGTT CATCAAGCAT CGCCTGACCC GCATGCCGAT CGGGCGTGCC
TGGGAAGCCT TGCGCGAGGA CGAGATCGCC TGTCGTTCGA TGGGCCTCAA TCATGTGCTG
GTCAAGCTGT CGGCGTTCAC CATCGGTGCG TCGACCGCAG GCCTTGCCGG AGTGTTTTTC
GCCAGCTATC AGGGCTTCGT CAACCCGACC TCATTCACCT TTTTCGAGTC GGCGCTGATT
CTGGCGATCG TGGTGCTGGG CGGCATGGGC TCGACCGTCG GTGTGGTGAT CGCCGCGTTC
GTGCTGACCG TTGCGCCTGA ACTGCTGCGC AGCTTCTCCG AATACCGCGT GCTGCTGTTC
GGGATTCTGA TGGTGCTGAT GATGATCTGG CGACCACGCG GCCTGATTCG CATCAGCCGC
ACCGGGGTAA AACCGCGCAA GGGCGCGCTG GTGACAGAGA GGGCTGCGCG ATGA
 
Protein sequence
MSAPVAVPVS KPVEIKKSLI DAVVAGLLAL IVFGPIVGIV LDGYSFNLQP TRVAWLVGVV 
MIGRFLISLF LQTPRGLRVS QSFESSDSGV HVLKPDHRSS LYWIIPLLIV IAIVFPIFAN
KYILTVVILG LIYVLLGLGL NIVVGLAGLL DLGYVAFYAI GAYGLALGYQ YLGLGFWSAL
PLAAIAAALA GCILGFPVLR MHGDYLAIVT LGFGEIIRLV LNNWLSFTGG PNGVPVPAPT
FLGLEFGRRA KDGGVPIHEY FGFDYNPDLK FIFIYTVLFL VVLAVLFIKH RLTRMPIGRA
WEALREDEIA CRSMGLNHVL VKLSAFTIGA STAGLAGVFF ASYQGFVNPT SFTFFESALI
LAIVVLGGMG STVGVVIAAF VLTVAPELLR SFSEYRVLLF GILMVLMMIW RPRGLIRISR
TGVKPRKGAL VTERAAR