Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0599 |
Symbol | |
ID | 3366077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 687919 |
End bp | 689232 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650941 |
Product | inner-membrane translocator |
Protein accession | YP_233707 |
Protein GI | 66043866 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.512727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.577839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCTC CTGTTGCTGT TCCTGTTTCC AAACCTGTCG AAATCAAGAA GAGTCTGATC GATGCCGTAG TCGCCGGGTT GCTGGCGCTG ATCGTATTCG GCCCCATTGT CGGGATCGTG CTCGATGGCT ACAGCTTCAA CCTGCAACCG ACGCGCGTGG CCTGGCTGGT GGGCGTGGTC ATGATCGGTC GCTTTCTGAT CAGTCTGTTT CTGCAAACAC CCAGAGGCCT GCGTGTTTCC CAGAGCTTCG AAAGCTCCGA CTCCGGCGTG CATGTGCTCA AACCGGATCA TCGATCAAGC CTGTACTGGA TCATTCCGCT GCTGATCGTG ATTGCCATCG TGTTCCCGAT CTTCGCCAAC AAGTACATTC TGACCGTGGT CATCCTCGGT CTGATCTACG TGCTGCTGGG CCTGGGGCTG AACATCGTGG TCGGTCTGGC GGGGCTGCTC GACCTTGGCT ACGTGGCGTT TTACGCCATC GGTGCTTATG GTCTGGCGCT GGGCTATCAG TATCTGGGCC TGGGCTTCTG GTCGGCCTTG CCGCTGGCGG CGATCGCGGC GGCGCTGGCC GGGTGCATTC TCGGCTTCCC GGTGTTGCGC ATGCATGGCG ACTATCTGGC CATCGTGACG CTAGGGTTCG GCGAGATCAT TCGCCTTGTG TTGAATAACT GGCTGTCGTT CACCGGCGGC CCGAACGGTG TGCCGGTGCC GGCGCCCACC TTCCTCGGGC TGGAGTTTGG CCGACGCGCC AAGGACGGCG GGGTGCCGAT CCATGAATAT TTCGGCTTCG ATTACAACCC GGACCTGAAA TTCATCTTCA TCTACACCGT GCTGTTCCTG GTCGTGCTGG CGGTGCTGTT CATCAAGCAT CGCCTGACCC GCATGCCGAT CGGGCGTGCC TGGGAAGCCT TGCGCGAGGA CGAGATCGCC TGTCGTTCGA TGGGCCTCAA TCATGTGCTG GTCAAGCTGT CGGCGTTCAC CATCGGTGCG TCGACCGCAG GCCTTGCCGG AGTGTTTTTC GCCAGCTATC AGGGCTTCGT CAACCCGACC TCATTCACCT TTTTCGAGTC GGCGCTGATT CTGGCGATCG TGGTGCTGGG CGGCATGGGC TCGACCGTCG GTGTGGTGAT CGCCGCGTTC GTGCTGACCG TTGCGCCTGA ACTGCTGCGC AGCTTCTCCG AATACCGCGT GCTGCTGTTC GGGATTCTGA TGGTGCTGAT GATGATCTGG CGACCACGCG GCCTGATTCG CATCAGCCGC ACCGGGGTAA AACCGCGCAA GGGCGCGCTG GTGACAGAGA GGGCTGCGCG ATGA
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Protein sequence | MSAPVAVPVS KPVEIKKSLI DAVVAGLLAL IVFGPIVGIV LDGYSFNLQP TRVAWLVGVV MIGRFLISLF LQTPRGLRVS QSFESSDSGV HVLKPDHRSS LYWIIPLLIV IAIVFPIFAN KYILTVVILG LIYVLLGLGL NIVVGLAGLL DLGYVAFYAI GAYGLALGYQ YLGLGFWSAL PLAAIAAALA GCILGFPVLR MHGDYLAIVT LGFGEIIRLV LNNWLSFTGG PNGVPVPAPT FLGLEFGRRA KDGGVPIHEY FGFDYNPDLK FIFIYTVLFL VVLAVLFIKH RLTRMPIGRA WEALREDEIA CRSMGLNHVL VKLSAFTIGA STAGLAGVFF ASYQGFVNPT SFTFFESALI LAIVVLGGMG STVGVVIAAF VLTVAPELLR SFSEYRVLLF GILMVLMMIW RPRGLIRISR TGVKPRKGAL VTERAAR
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