Gene Psyr_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0598 
Symbol 
ID3366076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp687002 
End bp687916 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content58% 
IMG OID637650940 
Productinner-membrane translocator 
Protein accessionYP_233706 
Protein GI66043865 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.34105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.520758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAA TCTTCCTGCA ACAAATGGTC AACGGACTCA CTCTCGGGTC TGTCTATGGC 
CTGATCGCCA TCGGCTACAC GATGGTTTAC GGCATCATCG GCATGATCAA CTTCGCCCAT
GGCGACGTGT ACATGATTTC CGCCTACCTG GCCGCCATCG GCCTCGCGGT TCTGTCTTTC
TTCGGAGTGG AATCCTTTCC GTTCCTGATT CTCGGTACGC TGGTGTTCAC CATTGTGGTC
ACCGGCGTTT ACGGCTTCGT CATCGAGCGT GTGGCTTACA AGCCACTGCG CAACTCGACC
CGTCTGGCGC CGCTGATCAG CGCCATCGGC ATTTCCCTGA TCCTGCAGAA CTACGCACAG
ATCAGCCAGG GTGCGCGCCA GCAAGGCGTG CCTACACTGC TCGAAGGTGC GTGGCGCTTT
GAAGTCGGCA GCGGCTTCGT ACAGATCACC TACACCAAGA TCTTCATCCT CATTGCCGCC
TTCGTCGGCA TGGGCGTGCT GACCTACATC ATCAAGTACA CCAAGCTGGG CCGCATGTGC
CGGGCCACCC AGCAAGACCG CAAGATGGCC TCGATCCTCG GCATCAACAC CGACCGGGTC
ATTTCCTATG TGTTCATCAT CGGCGCTGCC ATGGCGGCAC TGGCCGGTGT GCTGATCACC
ATGAATTACG GCACGTTCGA CTTCTATGCC GGCTTCATCA TCGGCATCAA GGCGTTTACT
GCCGCCGTGC TGGGCGGGAT CGGCTCGTTG CCGGGTGCCA TGCTGGGCGG CTTGATCCTG
GGGGTTGCCG AGTCGCAGTT CTCCGGTCTG ATCAACTCCG ATTACAAAGA CGTGTTCAGT
TTCGGCCTGC TGGTGCTGAT CCTGATTTTC CGTCCCCAAG GCCTGCTGGG TCGCCCACTC
GTGGCGAAGG TATAA
 
Protein sequence
MDGIFLQQMV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GDVYMISAYL AAIGLAVLSF 
FGVESFPFLI LGTLVFTIVV TGVYGFVIER VAYKPLRNST RLAPLISAIG ISLILQNYAQ
ISQGARQQGV PTLLEGAWRF EVGSGFVQIT YTKIFILIAA FVGMGVLTYI IKYTKLGRMC
RATQQDRKMA SILGINTDRV ISYVFIIGAA MAALAGVLIT MNYGTFDFYA GFIIGIKAFT
AAVLGGIGSL PGAMLGGLIL GVAESQFSGL INSDYKDVFS FGLLVLILIF RPQGLLGRPL
VAKV