Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0598 |
Symbol | |
ID | 3366076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 687002 |
End bp | 687916 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650940 |
Product | inner-membrane translocator |
Protein accession | YP_233706 |
Protein GI | 66043865 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.34105 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.520758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGAA TCTTCCTGCA ACAAATGGTC AACGGACTCA CTCTCGGGTC TGTCTATGGC CTGATCGCCA TCGGCTACAC GATGGTTTAC GGCATCATCG GCATGATCAA CTTCGCCCAT GGCGACGTGT ACATGATTTC CGCCTACCTG GCCGCCATCG GCCTCGCGGT TCTGTCTTTC TTCGGAGTGG AATCCTTTCC GTTCCTGATT CTCGGTACGC TGGTGTTCAC CATTGTGGTC ACCGGCGTTT ACGGCTTCGT CATCGAGCGT GTGGCTTACA AGCCACTGCG CAACTCGACC CGTCTGGCGC CGCTGATCAG CGCCATCGGC ATTTCCCTGA TCCTGCAGAA CTACGCACAG ATCAGCCAGG GTGCGCGCCA GCAAGGCGTG CCTACACTGC TCGAAGGTGC GTGGCGCTTT GAAGTCGGCA GCGGCTTCGT ACAGATCACC TACACCAAGA TCTTCATCCT CATTGCCGCC TTCGTCGGCA TGGGCGTGCT GACCTACATC ATCAAGTACA CCAAGCTGGG CCGCATGTGC CGGGCCACCC AGCAAGACCG CAAGATGGCC TCGATCCTCG GCATCAACAC CGACCGGGTC ATTTCCTATG TGTTCATCAT CGGCGCTGCC ATGGCGGCAC TGGCCGGTGT GCTGATCACC ATGAATTACG GCACGTTCGA CTTCTATGCC GGCTTCATCA TCGGCATCAA GGCGTTTACT GCCGCCGTGC TGGGCGGGAT CGGCTCGTTG CCGGGTGCCA TGCTGGGCGG CTTGATCCTG GGGGTTGCCG AGTCGCAGTT CTCCGGTCTG ATCAACTCCG ATTACAAAGA CGTGTTCAGT TTCGGCCTGC TGGTGCTGAT CCTGATTTTC CGTCCCCAAG GCCTGCTGGG TCGCCCACTC GTGGCGAAGG TATAA
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Protein sequence | MDGIFLQQMV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GDVYMISAYL AAIGLAVLSF FGVESFPFLI LGTLVFTIVV TGVYGFVIER VAYKPLRNST RLAPLISAIG ISLILQNYAQ ISQGARQQGV PTLLEGAWRF EVGSGFVQIT YTKIFILIAA FVGMGVLTYI IKYTKLGRMC RATQQDRKMA SILGINTDRV ISYVFIIGAA MAALAGVLIT MNYGTFDFYA GFIIGIKAFT AAVLGGIGSL PGAMLGGLIL GVAESQFSGL INSDYKDVFS FGLLVLILIF RPQGLLGRPL VAKV
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