Gene Psyr_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0592 
Symbol 
ID3366070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp680557 
End bp681393 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID637650934 
Productintegrase catalytic subunit 
Protein accessionYP_233700 
Protein GI66043859 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.398355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.203644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA GGCCTTTACA TCCTCTGGAC GGCCTGCTGA AGTTTGCCGG TCTGGCACGC 
AGCACTTTTT ACTATCAACA AAAGGTACTG CTGGTAGATG ACAAATACGC CGGGCTGAAA
GACCTGATTC AGGCAACTTT CTACGAGCAC AAGGGCCGGT ATGGCTATCG TCGCATCACG
GCAGCTTTGC GCAGGGCGGG CCATCTTGTG AACCACAAGA CGGTGCAGAA ACTAATGGGG
CAGCTAGGCC TGAAGAGCCT GATACGCGTG AAGAAATACC GTTCCTACAA AGGCGAAACA
GGCAAGGCCG CGCCTAACCT GCTAAAGCGT GATTTCAAAG CGCAATACCT TAACCAGAAA
TGGGCCACCG ACGTGACCGA ATTCAAAGTA GGAGGCCAGA AACTTTATCT GTCGCCGATC
ATGGATCTGT ACAGCGGCGA AATCATTTCC TATGCGATTG CCAGGCGCCC GCTGTACTCC
ATGGTCGACG AAATGCTTGA AGGAGCATTT AAGCGGCTTG GACCGCATGA AAAGCCGATT
TTGCATTCCG ACCAGGGCTG GCAATATCGG ATGCCTATTT ACCAGCGACT GCTCAATGAG
AATTCGATCG CAGCCAGCAT GTCGCGCAAG GGTAACTGCT ACGACAACGC GGCTATTGAG
AGCTTTTTTA GCACGCTGAA ATCCGAATTT TTCTACCTGA ACAAATTTAA CGATCTGGAT
GAGCTTCAAG CGGGTATCGA AGAGTACATT GAGTATTACA ATCACTCACG CATAAAACTG
AAGCTTAACG GCCTGAGTCC TGTGGAATAC AGAATGCAGG CCGCCAAGGC AGCGTAG
 
Protein sequence
MELRPLHPLD GLLKFAGLAR STFYYQQKVL LVDDKYAGLK DLIQATFYEH KGRYGYRRIT 
AALRRAGHLV NHKTVQKLMG QLGLKSLIRV KKYRSYKGET GKAAPNLLKR DFKAQYLNQK
WATDVTEFKV GGQKLYLSPI MDLYSGEIIS YAIARRPLYS MVDEMLEGAF KRLGPHEKPI
LHSDQGWQYR MPIYQRLLNE NSIAASMSRK GNCYDNAAIE SFFSTLKSEF FYLNKFNDLD
ELQAGIEEYI EYYNHSRIKL KLNGLSPVEY RMQAAKAA