| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0588 |
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| Symbol | |
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| ID | 3366066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 673124 |
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| End bp | 676402 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637650930 |
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| Product | transglutaminase-like |
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| Protein accession | YP_233696 |
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| Protein GI | 66043855 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.332727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATTC ATATTGCCTT GCACCATGTC ACGCATTATC GCTACGACCG CGCGGTCGAA
CTGGGTCCGC AGATCGTTCG CCTGCGCCCG GCCGCCCATA GCCGCACACG CGTGCTGTCG
TATTCGCTGA AAGTCCTGCC TGAAAACCAT TTCATCAACT GGCAGCAGGA CCCTCAAGGT
AATTACCTGG CGCGTCTGGT CTTCCCGGAA AAGACCGATG AATTTCGCGT CGAAGTCGAT
CTGGTCGCCG AGATGGCGGT GTTCAATCCG TTCGACTTCT TCCTCGAGCC CTACGCCGAG
AACATCCCGT TCACTTACGC CAGCGAAGAG CAGCGCGAGC TGGCGCCGTA CCTCGAAAAA
CTGCCGCTGA CCCCGAGATT TCAGGCGTAC CTGGACAGCA TCAGTCGCGA GCCGATTCCG
GCCATCGACT TTCTGGTCGG CCTCAATCAG CGCCTGAGTC AGGACGTGGC TTACCTGATC
CGCATGGAAC CGGGCGTTCA GACTCCGGAA TTCACCCTGG AAAACGCCTC GGGCTCGTGC
CGTGACTCCG CTTGGCTGCT GGTGCAACTG CTGCGTCATC TGGGCATGGC GGCGCGCTTC
GTGTCGGGCT ACCTCATTCA GCTCAAGGCA GATGTCGAGG CGCTCGACGG GCCGTCGGGT
ACGGATGTCG ATTTCACCGA CCTGCACGCC TGGTGCGAGG TCTATCTGCC GGGCGCGGGC
TGGGTCGGGC TGGATGCCAC TTCCGGCCTG TTCGCTGGTG AAGGGCACAT TCCCCTCGCA
TGCAGCCCCG AGCCTTCCTC GGCGGCACCG ATCAGCGGTC TGGTCGAGCC CTGCGAAACC
GAATTCAGCC ATGAAATGTC GGTCGAGCGT ATCTGGGAGG CGCCGCGCGT CACCAAGCCT
TACACCGAGG CGCAATGGCA GGACATCCAG GCCCTGGGCC GACAGATCGA CGCCGATCTG
CTGCGCGACG ATGTGCGCCT GACCATGGGC GGCGAGCCGA CCTTCGTGTC CATCGACGAT
CGCGATGGCG CCGAATGGAA CACCGCCGCG CTGGGGCCGC GCAAGCGTGA GCTGTCCGCC
GAGCTGTTCC AGCGCATGCG CGGGCATTAC GCGCCGCTGG GCATCGTGCA TTTCGGGCAG
GGCAAATGGT ATCCGGGTGA GCAGTTGCCG CGCTGGTCGC TGAACTGCTT CTGGCGCAAG
GACGGCCAGC CGGTGTGGCG CAATAATGCA CTGATCGCCG ATGAAACCCG CGACTACGGC
GCTACCGGCG AACTGGCGGG GCGTTTTCTG GCCAGCGTTG CCGAGCGTCT GAAGCTGCCG
GCCCGCTTCG TTTTCCCGGC TTACGAAGAC AATTTCTACT ACTTGTGGCG CGAAGGCGCG
TTGCCGGTCA ACGTCACGGC CGAAGACTCG CGGCTGGGCG ATGAGCTGGA GCGTGCGCGC
CTGCGCAAGG TCTTTGCCCA GGGGCTGGAC AAGATGATCG GTCAGGTCCT GCCGCTGGCC
CGCAACGCGG ACGGTGACAG CTGGCAGAGT GGCCGCTGGT ACCTGCGTGA CGAGCATTGC
CGTCTGGTGC CGGGCGATTC TGCGCTGGGC TATCGATTGC CGCTGGCGTC GCAGCCTTGG
GTCAAGGCGG CGGAATACCC GTTCATTCAC CCGACCGACC ATAACCAGGA CTTCCCCGAG
CTGGCCGACA GCGACTCGTT GACCTCGGCG CTCAAGTCCA CAGACACGGA CGCCGAGCGC
GCGCCGAAGA TCGACGAGTC GGCCGACTGG CTGACCCGCA CGGCGTTGTG TGCCGAAGCG
CGCGAAGGGC GGCTGTACCT GTTCATGCCG CCGCTGCAAA AGCTTGAGGA ATACCTTGAG
CTGGTGGCCG TGATCGAAGC GACGGCAGAA GAACTGCAGT GCCCGATCCT GCTGGAAGGC
TACGAGCCGC CAAGCGATCC GCGGCTGTGC AATTTCCGGA TCACCCCGGA CCCTGGCGTG
ATCGAGGTCA ACGTGCAGCC CTCGGCGAGC TGGGACGAGC TGGTCGAGCG CACCGAGTTT
CTCTATGAAC AGGCGCGCCT CACGCGTCTG ACCACCGAGA AGTTCATGAT CGATGGCCGT
CACACCGGCA CCGGCGGGGG CAACCATTTC GTCCTGGGCG GCGCCACGCC GGCGGACTCG
CCGTTTCTAA GGCGTCCGGA CCTGCTGCGC AGCCTGATCA GCTACTGGCA CAACCATCCT
TCGCTGTCGT ACCTGTTTTC CGGCCTGTTC ATCGGCCCGA CGTCCCAGGC ACCGCGCATC
GACGAGGCGC GCAACGACTC GCTCTACGAG ATGGAAATCG CTTTTGCACA GATGCCGAAG
CCAGGCGAGG AGGTTGCGCC GTGGGTGGTG GACCGACTGC TGCGTAACCT GCTGATCGAC
GTCACCGGCA ATACCCACCG TGCCGAGTTC TGCATCGACA AGCTTTACTC GCCCGATGGT
GCAACCGGAC GTCTGGGGCT GCTGGAGCTG CGTGCGTTCG AGATGCCGCC GCATGCACGC
ATGAGCCTGG CGCAGCAGTT GTTGCTGCGC GCCCTGGTGG CGCGCTTCTG GCGTGAACCC
TACGCCCCCG CGAAACTGGC GCGCTGGGGC ACGCAACTGC ATGACCGCTT CATGCTGCCG
CACTTCATCG AGCAGGATTT TGCCGATGTG GTTGCCGACC TCAACGCGGC AGGCTATCCG
GTGCAGGCCG ACTGGTTCTC TGCGCACCTG GAATTCCGCT TCCCGAAAGT GGGCGATTAC
GCCGTCAACG GTATCGAGCT GGAACTGCGT CAGGCGCTGG AGCCCTGGCA TGTCCTGGGT
GAAGAGGGCT CGGCCGGCGG CGCGGTGCGC TATGTCGATT CATCGCTGGA GCGTCTGCAA
GTGCATATCA GCGGGCTGCC GCCGCAGCGC TACGTGCTGA CTTGTAACGG TGTGGCAGTG
CCTCTGCAGC CGACCGGGCG GGCCGGCGAG TTCGTTGCCG GTGTGCGTTA TCGCGCCTGG
CAGCCGGCCA ACTGCCTGCA ACCGACCATC GGCGTGCATG CGCCACTGGT TTTCGATCTG
CTCGACACCT GGATGCACCG CTCGCTGGGT GGCTGCGAGT ATCATGTCGC CCACCCGGGC
GGCCGTAACT ACGAAACCTT GCCGGTCAAC GCCAACGAAG CGGAAAGCCG TCGCCTGTCA
CGTTTCTTCC GCATCGGCCA CACCCCGGGC AAACTGGACG TTCCGTCGCT CAACATTAAC
GACGAGCTGC CGATGACGCT GGATATGCGT CTGCATTAA
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| Protein sequence | MSIHIALHHV THYRYDRAVE LGPQIVRLRP AAHSRTRVLS YSLKVLPENH FINWQQDPQG
NYLARLVFPE KTDEFRVEVD LVAEMAVFNP FDFFLEPYAE NIPFTYASEE QRELAPYLEK
LPLTPRFQAY LDSISREPIP AIDFLVGLNQ RLSQDVAYLI RMEPGVQTPE FTLENASGSC
RDSAWLLVQL LRHLGMAARF VSGYLIQLKA DVEALDGPSG TDVDFTDLHA WCEVYLPGAG
WVGLDATSGL FAGEGHIPLA CSPEPSSAAP ISGLVEPCET EFSHEMSVER IWEAPRVTKP
YTEAQWQDIQ ALGRQIDADL LRDDVRLTMG GEPTFVSIDD RDGAEWNTAA LGPRKRELSA
ELFQRMRGHY APLGIVHFGQ GKWYPGEQLP RWSLNCFWRK DGQPVWRNNA LIADETRDYG
ATGELAGRFL ASVAERLKLP ARFVFPAYED NFYYLWREGA LPVNVTAEDS RLGDELERAR
LRKVFAQGLD KMIGQVLPLA RNADGDSWQS GRWYLRDEHC RLVPGDSALG YRLPLASQPW
VKAAEYPFIH PTDHNQDFPE LADSDSLTSA LKSTDTDAER APKIDESADW LTRTALCAEA
REGRLYLFMP PLQKLEEYLE LVAVIEATAE ELQCPILLEG YEPPSDPRLC NFRITPDPGV
IEVNVQPSAS WDELVERTEF LYEQARLTRL TTEKFMIDGR HTGTGGGNHF VLGGATPADS
PFLRRPDLLR SLISYWHNHP SLSYLFSGLF IGPTSQAPRI DEARNDSLYE MEIAFAQMPK
PGEEVAPWVV DRLLRNLLID VTGNTHRAEF CIDKLYSPDG ATGRLGLLEL RAFEMPPHAR
MSLAQQLLLR ALVARFWREP YAPAKLARWG TQLHDRFMLP HFIEQDFADV VADLNAAGYP
VQADWFSAHL EFRFPKVGDY AVNGIELELR QALEPWHVLG EEGSAGGAVR YVDSSLERLQ
VHISGLPPQR YVLTCNGVAV PLQPTGRAGE FVAGVRYRAW QPANCLQPTI GVHAPLVFDL
LDTWMHRSLG GCEYHVAHPG GRNYETLPVN ANEAESRRLS RFFRIGHTPG KLDVPSLNIN
DELPMTLDMR LH
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