Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0567 |
Symbol | |
ID | 3366043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 644229 |
End bp | 645719 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637650907 |
Product | hypothetical protein |
Protein accession | YP_233675 |
Protein GI | 66043834 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACA CTAAACCTCA TTTACCCGAC GCGCTGTACA GCGCTGCGCA GGTCCGCGAC CTCGACGCAC GGCTGATTGC GGCCGGTACA CCCGGCCTGG AATTGATGCT GCGTGCCGCG CAGGCGTTGT GGCACACGCT ACTTCGGCGC TGGCCTCAGG CCAACGAGCT GACCGTATTG ACCGGGCGTG GTAACAACGC CGGTGACGGG TATCTGGTGG CTGCAATGGC GCACAAGGCC GGCTGGCAGG TCAGGGTGCT GGCCGTCGGC GACCCGGCTG CACTGACCGG TGATGCTGCG GCGGCGCATG CTGCGGCTTT CGGTATTGAT ATTCAGGCAT GGGCCGGGCA GTCGCTGGCC GGTGTCGTGC TGGATGCCTT GCTCGGTACC GGGCTCGACG GCGAGGTGCG CGAGCCCTAT GTCTCGGCCA TCAAGGCTGT CAACGACAGT GGTCTGCCCG TCGTGGCGGC GGATATTCCG TCTGGCTTGA GCGCAGATAC CGGCCAGACG CTGGGTGTCG CGGTGCGTGC CGATGTGACC GTTACGTTCA TCGGCCTCAA ACTGGGGTTG CTGACGGGGG ATGCGGCGGA TCTGGTGGGT GAGCTGATTT TCGACGACCT GCGAGCAGAC CCGGCGCTGG TGGCGCAGAT GCCGTTCAGC GCGAAGCGCC TCGATAAACA CAACCTGCCA CAACTGGCAG CGCGTCCGCG GACCGCTCAT AAAGGCATGT TTGGCCGCGT GCTGGTCATC GGTGGCGATC ACGGTTTTGG TGGTGCCGCG TTGCTCAGCG CCGAAAGCGC CCTGCGCAGC GGTGCAGGCA TGCTGACGCT GGCCACACGG CCCGAGCACG TTGCGGCCGC CCTGACGCGC ATGCCGGAGA TCATGAGCGC GGCAATTCAT TCGGCCAACC AGCTGATGGG CTTGATCGAG CCAGCCAGCG TGCTGGTGGT CGGCCCCGGA CTGGGGCAGT CGGCCTGGGG GCGCAGCCTG CTGTCGGCAG CCGCCAATGC GGATCGTCCG CAGGTGTGGG ACGCCGATGC GCTGAATATG CTGGCCGCCG GGCTGGTCAG CCTGCCCAAA GGCAGTGTCA TCACCCCGCA TCCGGGCGAG GCGGCACGCT TGCTGGGCGT GGGCATCAAG GAGGTTCAGG CGGACCGGGC CGCTGCAGTA CGAGCGCTGG CGCGTAAATT CGATACGGTT TGTGTGCTCA AGGGCTCCGG CAGCCTGATT GCCGACGCGC ACGGGCAACT GGCGCTGTGC GACCGCGGTC ATCCGGCCAT GGCCACTGCG GGACTGGGTG ACGTGCTGGC CGGATTGATC GGTGCGCTGA TGGCGCAGCA TCTCAAGCCA TTCGACGCGG CCTGTCTGGC GGTATGGCTG CACGCAAGCG CCGGTCAGAA AGTCGGCGAG TACGGTCGCG GGTTGGCCGC CAGCGATATT ATTCCTGCCA TTCGTCAGTT ACTGGAGGAG CTGCAACCGT GTCTGATTTA A
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Protein sequence | MFDTKPHLPD ALYSAAQVRD LDARLIAAGT PGLELMLRAA QALWHTLLRR WPQANELTVL TGRGNNAGDG YLVAAMAHKA GWQVRVLAVG DPAALTGDAA AAHAAAFGID IQAWAGQSLA GVVLDALLGT GLDGEVREPY VSAIKAVNDS GLPVVAADIP SGLSADTGQT LGVAVRADVT VTFIGLKLGL LTGDAADLVG ELIFDDLRAD PALVAQMPFS AKRLDKHNLP QLAARPRTAH KGMFGRVLVI GGDHGFGGAA LLSAESALRS GAGMLTLATR PEHVAAALTR MPEIMSAAIH SANQLMGLIE PASVLVVGPG LGQSAWGRSL LSAAANADRP QVWDADALNM LAAGLVSLPK GSVITPHPGE AARLLGVGIK EVQADRAAAV RALARKFDTV CVLKGSGSLI ADAHGQLALC DRGHPAMATA GLGDVLAGLI GALMAQHLKP FDAACLAVWL HASAGQKVGE YGRGLAASDI IPAIRQLLEE LQPCLI
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