Gene Psyr_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0565 
Symbol 
ID3366041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp641729 
End bp642340 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID637650905 
Producthypothetical protein 
Protein accessionYP_233673 
Protein GI66043832 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGA TGCTTTATCT GATCGCTATC ACTGCTGAAG CCATGACGGG AGCCCTGTCT 
GCAGGGCGAC GCGGGATGGA CTGGTTCGGC GTGGTGCTGA TCGCCTGCGT CACTGCGCTG
GGTGGCGGGT CGGTGCGCGA CGTACTGATC GGTCATTACC CGCTGACCTG GGTCAAGCAT
CCGGAGTATC TGGTCCTGAC CAGTGTGGCG GCCCTGGTGA CGATCTTCAT CGCGCCACTG
ATGCGTCATC TGCGCTCACT GTTTCTGGTG CTCGACGCGC TGGGACTGGT GGCTTTTACC
CTGATCGGCT GTATGACTGC GCTGGAGGCC GGGCACGGTC TGCTGATCGC GTCAGTCTGT
GGCGTGATCA CCGGGGTATT CGGCGGCATC CTGCGCGACA TCTTCTGCAA CGACATCCCG
CTGATCTTCC GCCGCGAGCT GTACGCCAGC GTGTCATTTC TGGCCGCGTG GTGTTTTCTG
CTATGCCAGT ACCTGCAGTT GCCGGACGAG CAAGCGGTGC TGATCACCCT GTTCGGTGGC
CTGCTGCTGC GCCTGCTGGC GATTCGTTTC CGCTGGGAAA TGCCCAAGTT TGTCTATAAA
GACGAGCCTT GA
 
Protein sequence
MLLMLYLIAI TAEAMTGALS AGRRGMDWFG VVLIACVTAL GGGSVRDVLI GHYPLTWVKH 
PEYLVLTSVA ALVTIFIAPL MRHLRSLFLV LDALGLVAFT LIGCMTALEA GHGLLIASVC
GVITGVFGGI LRDIFCNDIP LIFRRELYAS VSFLAAWCFL LCQYLQLPDE QAVLITLFGG
LLLRLLAIRF RWEMPKFVYK DEP