| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0559 |
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| Symbol | psd |
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| ID | 3366035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 634369 |
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| End bp | 636201 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637650899 |
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| Product | bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase |
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| Protein accession | YP_233667 |
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| Protein GI | 66043826 |
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| COG category | [I] Lipid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase
[COG2897] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT TCACTGGCTT GTCGCTGGTC ATCGAACCCA ACGATCTGCT TGAGCGTCTA
GACGCCCCGG AACTGATCCT CGTGGATCTG ACCAGCAGCG CTCGCTACGA AGCCGGGCAC
ATTCGCGGTG CCCGCTTCGT CGATCCGAAA CGTACACAAC TGGGCACGCC TCCTGCCCCC
GGCCTGCTGC CCGACACGGC CGGTCTTGAG CAAGTGTTCG GCGAGCTGGG CCACAACCCT
GACGCTGTCT ATGTCGTCTA CGATGACGAA GGCGGCGGCT GGGCCGGGCG TTTCATCTGG
CTGCTGGATG TCATCGGCCA CAGCCGTTAT CACTATCTGG ACGGTGGACT GCTGGCCTGG
GAAGCGCAAT TGCTGCCGCT GAGCACCGAC GTGCCGCCTG CTGCCGATAC TCCGGTAACG
CTGACGCTGC ACGATGAACC TACCGCCACG CGCGAGTACC TGCAAAGCCG TCTGGGCGCC
GCCGATCTGG CGATCTGGGA TGCCCGCGCG CCGACCGAGT ATTCGGGCGA AAAAGTGGTC
GCGGCCAAAG GCGGGCACAT ACCCGGCGCC GTCAATTTCG AGTGGACGGC GGGGATGGAC
AAGGCGCGCA ACCTGCGTAT TCGCCAGGAC ATGCCGGAGA TCCTCCGCGA CCTGGGCATC
ACGCCCGACA AGGAAATCAT CACGCACTGT CAGACCCATC ACCGCTCGGG CTTCACCTAT
CTGGTGGCCA AGGCGCTTGG CTATCCAAGG GTCAAGGCAT ATGCCGGCTC GTGGGGCGAA
TGGGGCAATC ATCCGGATAC ACCGGTAGAA GTACCGAATG TGGCCGCCGC GCCCGTCGAG
GCAGTCGAGG TTGCGCAACC CGCAGAGCCT GCCCAGCCAG CCCCGGCCGA AACCGTCGAA
CCGGTCCGCG CCACCGAACC GGGACGGACC TCACAGAAAT ATTCAGGACA CTCATCCTCA
GGACCTTCAA TGAAAGACCG CTTGTTCATC ATCAGCCAGT ACCTGCTGCC GCACCACCTG
CTGTCCCGAC TGGCAGGCTG CGTTGCCGAA TGCCGCGTAC GCTGGTTCAA AAACGCTTTC
ACTGCGTGGT TTGCCCGCAG TTATCAGGTG GACATGTCGC AGGCACTGGT CGAAGACCTG
ACGTCCTACG AGCACTTCAA CGCGTTCTTC ACCCGCGCAT TGAAAGCCGA CGCCCGCCCG
CTCGATGCCA CGCCGGGCGC GATTCTCTCG CCGGCCGACG GTGCCATCAG CCAGTTGGGC
CCTATCGACC ACGGCCGGAT CTTCCAGGCC AAGGGCCACA GTTTCAGCGT ACTGGAACTG
CTCGGCGGCG ACCCCAAGCT GTCGGCGCCG TTCATGGGCG GCGAATTCGC GACCGTTTAC
CTGTCGCCGA AGGACTATCA CCGCGTACAC ATGCCACTGG CCGGCACGCT GCGTGAAATG
GTCTACGTAC CGGGCCGCAT CTTCTCGGTC AACCAGACCA CGGCTGAAAA CGTACCCGAG
CTGTTCGCCC GTAACGAGCG AGTGGTCTGC CTGTTCGATA CCGAGCGCGG GCCAATGGCA
GTGGTACTGG TGGGCGCGAT GATCGTGGCG TCTGTCGAAA CGGTATGGGC CGGACTGGTC
ACACCGCCCA AGCGTGAATT GAAGACGTTC AGCTACGACG AAGCGGCGCG TGCGCCGATC
CACCTGGAAA AAGGTGCCGA GATGGGTCGG TTCAAGCTGG GCTCTACCGC CATCGTGCTG
TTCGGTCCAG GTCAGGTGAA ATGGGCCGAA CAACTGACGG CCGGCTCCAA GGTTCAAATG
GGCCAGGCAC TGGCCGTTCC GGCACAGGCA TGA
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| Protein sequence | MSAFTGLSLV IEPNDLLERL DAPELILVDL TSSARYEAGH IRGARFVDPK RTQLGTPPAP
GLLPDTAGLE QVFGELGHNP DAVYVVYDDE GGGWAGRFIW LLDVIGHSRY HYLDGGLLAW
EAQLLPLSTD VPPAADTPVT LTLHDEPTAT REYLQSRLGA ADLAIWDARA PTEYSGEKVV
AAKGGHIPGA VNFEWTAGMD KARNLRIRQD MPEILRDLGI TPDKEIITHC QTHHRSGFTY
LVAKALGYPR VKAYAGSWGE WGNHPDTPVE VPNVAAAPVE AVEVAQPAEP AQPAPAETVE
PVRATEPGRT SQKYSGHSSS GPSMKDRLFI ISQYLLPHHL LSRLAGCVAE CRVRWFKNAF
TAWFARSYQV DMSQALVEDL TSYEHFNAFF TRALKADARP LDATPGAILS PADGAISQLG
PIDHGRIFQA KGHSFSVLEL LGGDPKLSAP FMGGEFATVY LSPKDYHRVH MPLAGTLREM
VYVPGRIFSV NQTTAENVPE LFARNERVVC LFDTERGPMA VVLVGAMIVA SVETVWAGLV
TPPKRELKTF SYDEAARAPI HLEKGAEMGR FKLGSTAIVL FGPGQVKWAE QLTAGSKVQM
GQALAVPAQA
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