| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0547 |
|---|
| Symbol | |
|---|
| ID | 3366023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 619676 |
|---|
| End bp | 620323 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637650887 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233655 |
|---|
| Protein GI | 66043814 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA CGGCGGCCAG CGAGAAACCC ATGACCCAGA CCACACGATC TGCACCAAGC
GCTTTTGAAA CCATAAAGCG TGAAAACTGC TTCAAGGGCT TCTATAAGCT GGACAAGCTG
CATGTGCGCC ACGAATTGTT CGCCGGCGGG ATGAGCAAGG AAATCAGCCG CGAACTGTTC
GTTCGCCACG ACGCCGTCTG CGTGCTGCCT TATGACGCCA AACGTGACGA AGTGGTGCTC
ATCGAGCAGT TTCGTGTAGG CGCCATGAAA AAGACCAACA ACCCTTGGCT GGTCGAACTG
GTCGCAGGTC TGATCGACAA GGACGAGCAG CCGGAAGAAG TTGCTCATCG CGAGGCGGAG
GAGGAAGCTG GGCTGAAGTT CGAAGCGCTG TGGCCGATCA CCAAATACTT CCCCTCGCCG
GGTGGCAGCG ACGAGTTCGT TCACCTGTTT CTGGGGCGTT GCAGCAGTGA AGGGGCGGGC
GGCTTGCACG GGCTGGAGGC CGAAGGTGAA GACATCCGGG TAACAGTCTG GTCATTCGAT
GACGCATTGC AGGCGATGAA AGACGGAACA ATCAAGAACG CATCGACGAT CATCGCCTTG
CAATGGCTGG CGCTGAATCG TGCCGAGATA AGGGGTTTAT GGTCGTGA
|
|---|
| Protein sequence | MSNTAASEKP MTQTTRSAPS AFETIKRENC FKGFYKLDKL HVRHELFAGG MSKEISRELF
VRHDAVCVLP YDAKRDEVVL IEQFRVGAMK KTNNPWLVEL VAGLIDKDEQ PEEVAHREAE
EEAGLKFEAL WPITKYFPSP GGSDEFVHLF LGRCSSEGAG GLHGLEAEGE DIRVTVWSFD
DALQAMKDGT IKNASTIIAL QWLALNRAEI RGLWS
|
|---|
| |