| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0536 |
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| Symbol | |
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| ID | 3366012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 604905 |
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| End bp | 606707 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637650876 |
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| Product | ABC transporter, transmembrane region:ABC transporter |
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| Protein accession | YP_233644 |
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| Protein GI | 66043803 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.742929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCT CCGAATCGTC CGCAACCTCC AGCGTGAAAA TCTATTTCCG CCTGTTGTCT
TATGTGCGTC CGTATGTGGG CATTTTCCTG CTCAGCATCA TTGGTTTCGT GATCTTCGCC
TCGACCCAGC CGATGCTCGC CGGCATCCTG AAATATTTCG TCGACGGCCT GACCAATCCC
GAAGCGGTGC TGTTTCCCAA TGTCCCGTAT CTGCGCGAGT TGCAGCTATT GCAGGCCGTG
CCGCTGCTGA TCGTGCTGAT TGCCGCATGG CAGGGGCTGG GCTCCTTTCT GGGCAACTAT
TTCCTGGCCA AGGTTTCCCT GGGGCTGGTG CATGACCTGC GGGTAGAGCT GTTCAACAAG
CTGCTGGTGC TGCCCAATCG TTACTTCGAT ACGACCAATT CCGGTCATCT GATCTCGCGC
ATCACCTTCA ACGTCACGAT GGTGACCGGC GCTGCCACCG ATGCTATCAA GGTGGTGATT
CGCGAAGGCC TGACCGTGGT GTTCCTGTTC ATCTATCTGC TGATGATGAA CTGGAAGCTG
ACACTGGTCA TGCTCGCGAT CCTGCCGTTG ATTGCCGTGA TGGTCGGCAC CGCGAGCAAG
AAATTCCGCA AGCAGAGCAA GAAGATCCAG GTGGCGATGG GCGATGTCAC GCATGTTGCC
TCGGAAACCA TTCAGGGCTA TCGCGTAGTC CGCAGCTTCG GTGGCGAGGC CTACGAGCAG
GCGCGCTTTG CCCAGGCCAG CAACAGCAAC ACCCAAAAGC AGCTGCGCAT GACCAAGACC
GGCGCCATCT ATACGCCGAT GCTGCAACTG GTGATCTACA GCGCCATGGC GGTGCTGATG
TTCCTGGTGC TGTTCCTGCG TGGCGAGGCA ACAGCGGGTG ATCTGGTTGC CTATATCACC
GCTGCGGGCC TGCTGCCCAA GCCGATTCGG CAGCTGTCGG AAGTCAGTTC GACGATCCAG
AAAGGCGTCG CCGGTGCCGA GAGCATCTTC GAACAGCTGG ATGTGGAAGA GGAAGTCGAC
ACCGGCACCA TCGAGCGTGA GCGCGTGACC GGCCACCTCG AGGTGAAGAA CCTCAGCTTC
TTCTACCCGC AGACTGCGCG TCAGGTGTTG AACGACATCA GTTTCTCCGC CGCGCCGGGG
CAGATGATTG CCCTGGTAGG ACGCTCCGGC AGCGGCAAGT CGACCCTGGC CAACCTGATC
CCGCGTTTCT ACGGGCACGA CATCGGCAAC ATCCTGCTCG ATGGCGTCGA GATCAACGAT
TATCGCTTGC GTAACCTGCG CAGGCACATC GCTCAGGTCA ATCAGAACGT CACGCTGTTC
AACGACACGA TTGCCAACAA CATTGCCTAC GGCGATCTGG CCGGTGCGCC GCGTGCCGAC
ATCGAAGCGG CTGCCGCTGA TGCGTACGCC AGGGAATTCA TCGACCAGTT GCCGCAGGGG
TTCGACACCC AGGTGGGCGA AAACGGTGTG CTGCTGTCCG GCGGTCAACG CCAGCGTCTG
GCAATTGCCC GCGCGCTGCT CAAGAACGCC CCGTTGCTGA TTCTCGACGA AGCCACCTCG
GCGCTGGACA CCGAGTCCGA GCGGCACATC CAGGCGGCGC TGGATCACGT CATGAAGGGC
CGTACCACGC TGGTCATCGC CCACCGCCTT TCGACCATCG AGAAGGCCGA CCTGATTCTG
GTCATGGACG CCGGGCAAAT CGTCGAACGC GGTACGCACA CCGAGCTGCT GGCGCAGAAC
GGCTATTACG CCCGCCTGCA TGCCATGGGG CTGGACGAGC CGGCTCCGGT CGGCGCGGTC
TAA
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| Protein sequence | MTTSESSATS SVKIYFRLLS YVRPYVGIFL LSIIGFVIFA STQPMLAGIL KYFVDGLTNP
EAVLFPNVPY LRELQLLQAV PLLIVLIAAW QGLGSFLGNY FLAKVSLGLV HDLRVELFNK
LLVLPNRYFD TTNSGHLISR ITFNVTMVTG AATDAIKVVI REGLTVVFLF IYLLMMNWKL
TLVMLAILPL IAVMVGTASK KFRKQSKKIQ VAMGDVTHVA SETIQGYRVV RSFGGEAYEQ
ARFAQASNSN TQKQLRMTKT GAIYTPMLQL VIYSAMAVLM FLVLFLRGEA TAGDLVAYIT
AAGLLPKPIR QLSEVSSTIQ KGVAGAESIF EQLDVEEEVD TGTIERERVT GHLEVKNLSF
FYPQTARQVL NDISFSAAPG QMIALVGRSG SGKSTLANLI PRFYGHDIGN ILLDGVEIND
YRLRNLRRHI AQVNQNVTLF NDTIANNIAY GDLAGAPRAD IEAAAADAYA REFIDQLPQG
FDTQVGENGV LLSGGQRQRL AIARALLKNA PLLILDEATS ALDTESERHI QAALDHVMKG
RTTLVIAHRL STIEKADLIL VMDAGQIVER GTHTELLAQN GYYARLHAMG LDEPAPVGAV
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