Gene Psyr_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0534 
Symbol 
ID3366010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp602933 
End bp604102 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID637650874 
Producthypothetical protein 
Protein accessionYP_233642 
Protein GI66043801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTTG ACCCGATAAG AGTACCCGGC AGCAAAGTAC AGCAGTACTT CACCGCTGCC 
ATCGTCATCT TCCTGCTGAG TTTCATCCTC AACCCATCAG CCAAGATCAC CAACAATCTG
TTTTATGCAT TCACGGCGCT GCCGGGCTTG TTCTTTCTGA TCAGGTACCG AGCCGCTGGC
GTGTTTGCCA AGCCACTGGG CATTGCCTGG GCGGTGTTCA TGGCCTGCTT TCTGGTCCCC
GCGCTGCAGG CGCAGGAGTT CCAGTATTAC AAGCACATCA TCTACGTCAG CCTGTTTGTC
TTTGTCGTGG CCGGGATTAC CGACAACGGC TTCTTCAGGC GCGGTGTCTT CGTGCGCAGC
ATGTTCTGGG TCATATGCCT GTACATCCTG CTCAGCAGCA TTCACAGCTG GGTGACCGGG
CAGTTCGAAT TCGGCCAGCG TGTGGCGATT CTGCCGGGGC GAATGGAGAA CGTGATCTAC
GCCAGTGCCT GGCTGGTCTG CAGCCTTGCG TTGGCCATGC CGCTGTGGGC AAGAGAGCGT
CGCTGGGTCG AGGCTGTCTG CGCCGTTCTT GTCACCCTGG TGATAAGCGC CTTCGTAGTG
CAGACGCGTA CTGCACTGGT GGGTTGCGCC GTTCTGTTTG CCGTCTGCAC CGCCTATTCG
CTGTACCGTT TCCCTCTGCG TACGATAGTG GCTTTGTTGG CGCTTGGCGT TGTGGCGGCA
GCAGCCTTCT GGTTCGTCAA GGATGAACAG TGGGTCGCGC TGCTGACGGC CAGAGGTGAT
TCCTACCGCA TCGAGCTGTT TGAAATCATG ACCGGTGAAT GGCGTCGCTG TGGCTGGATG
CTCGGCTGCG GTGTCGATTT CTATACGACC CAGACCCTGA CGGGCGGCAT ACCGATCCAG
CACCCGCACA ATATTTTCGT GTCGCTGGGG CTGTATACCG GCGCGGCGTC GCTGGTGATG
TTTCTGGTCG TGATGGCGAT GACGCTGTGG GACGCCTTGC GCAACGGCGA TGCCTGGGGT
CTTTACCTGG TGTGCGCGCT GGTCATGCTT AACTTCGACG GTGGCCAGCT GGTCGGTAAT
CCCGACGAGC TCTGGGTGCT GGTGCTGTTA CCGGCGACCA TGGTGCTCGG GAGAGTGGTG
CAGACGCATC GGCTCAGGCA GCAGCAATAG
 
Protein sequence
MSVDPIRVPG SKVQQYFTAA IVIFLLSFIL NPSAKITNNL FYAFTALPGL FFLIRYRAAG 
VFAKPLGIAW AVFMACFLVP ALQAQEFQYY KHIIYVSLFV FVVAGITDNG FFRRGVFVRS
MFWVICLYIL LSSIHSWVTG QFEFGQRVAI LPGRMENVIY ASAWLVCSLA LAMPLWARER
RWVEAVCAVL VTLVISAFVV QTRTALVGCA VLFAVCTAYS LYRFPLRTIV ALLALGVVAA
AAFWFVKDEQ WVALLTARGD SYRIELFEIM TGEWRRCGWM LGCGVDFYTT QTLTGGIPIQ
HPHNIFVSLG LYTGAASLVM FLVVMAMTLW DALRNGDAWG LYLVCALVML NFDGGQLVGN
PDELWVLVLL PATMVLGRVV QTHRLRQQQ