Gene Psyr_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0531 
Symbol 
ID3366007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp599742 
End bp601151 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content65% 
IMG OID637650871 
ProductLmbE-like protein 
Protein accessionYP_233639 
Protein GI66043798 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTCGCA AGCAGCAGTT GCTCAAGCGC CATCGCCGTA ACAAGCGACT GGCGTTGCTG 
GGTGGACTGC TCCTGCTGAT CGCGGTGGGC GTGCTGGTGG CCTGGTGGCT GGCGCCGGTG
CTGGCCGTGT GTGCCTGGGT CGCCCATGAG GCCTGGTTCG CCGATCATCT GTTCTATTCG
CCGTCTGACG ATTATCAGTA CACCTTTGCT GCCGACAGCG AAGTGCCGGG CGTGCGCCTC
GACGGCGGCA CGTTGCTGAT CGACCCCGCA GTACAACTGA ACGGCGACGA AACGCTGATA
TTGGCACTGA CGGTCAAAAG CACCTGGCTC GGGCGCTTTC TCGATCCGGT GGTCGAGCTG
CAAGGTCAGG GCCTCAACGA CCAGCAGGCA TTCGAGCGCG GCGTCTGCGG CGTGCGTTAT
CTGAACCTGA CCGGCCTGGG CGAGCCGTTG GCCGCAGGTG TGCTGAAACT GCGCGGGCGT
TGCTGCCGCC TTGCCGGCAC ACCTCGTCTC TGGCTGTTTC GCCAACCGGA TGCGCGAAAA
CAGCGTGTCA TGGTCATCGC ACCGCACGCC GATGATGCCG AGCTGGCCGC CTTCGGGCTG
TACAGCCAGG CCGAGGAGGC GTGGATCATC ACGCTGACCG CCGGTGAGAT CGAGGCCGAG
CATTATCGGC AGATGGGCAT GGAGCGTGCC GAAGCTGCGC GTATGAAGGG CCGCTTGCGG
GCCTGGGACA GTATCGCCGT GGCGCGCTGG GGCGGGGTGC CCGAGTCGCA GTGTGTGCAA
TTGGGCTATT TCTGCCTGCA ACTGCCCGCC ATGCAGGCTG CGCCGGATAC GCCTGTTGGT
TCGCGGGAAG CCGATCTGAC CGATACCCGC CTGTTTCGTC AGTTCAATAC CCTGCCATTG
CCCGGCGACA ACGGCCAGCC GACCTGGAAT AACCTGCTCG CCGACCTGCG CGCGCTGATT
CTCAAGGCCC GGCCGCAGGT TGTGGTGATG CCGCATCCTG CCATCGACCC TCATCCCGAT
CACATCTGCG CCCAGGCTGC GGTGCGTGAA GCGCTGCTCG GGCTCGAATG GCAGCCGGAC
GTAGTGCTCG GTTATGCCAA TCACCTGCAC GACAACGACC GCTGGCCGAT GGGCGATGCC
TACAGCGGCA TCAGCCTGCC GCCGGTCTTC GATGCCACGC TGCCGCTGGT GCCGTACAGC
CTTCAATTGT CGGTCGCCGC GCAACGCGAC AAGGCCATGG CACTGGGCAT GATGCATGAC
CTGCTGCCAC GCATGCCGTT CAAGCGTCGT GTGCGCCGTG CGCTGCAGCG CGTTCTGGCC
GGTCGTCACT GGCCAGCCGA GGGCGAAAAC GAATTCTTCC GCAAGGCGGT GCGACGACAC
GAGTTGTTCT GGTGCAGCCG TGATCTCTGA
 
Protein sequence
MSRKQQLLKR HRRNKRLALL GGLLLLIAVG VLVAWWLAPV LAVCAWVAHE AWFADHLFYS 
PSDDYQYTFA ADSEVPGVRL DGGTLLIDPA VQLNGDETLI LALTVKSTWL GRFLDPVVEL
QGQGLNDQQA FERGVCGVRY LNLTGLGEPL AAGVLKLRGR CCRLAGTPRL WLFRQPDARK
QRVMVIAPHA DDAELAAFGL YSQAEEAWII TLTAGEIEAE HYRQMGMERA EAARMKGRLR
AWDSIAVARW GGVPESQCVQ LGYFCLQLPA MQAAPDTPVG SREADLTDTR LFRQFNTLPL
PGDNGQPTWN NLLADLRALI LKARPQVVVM PHPAIDPHPD HICAQAAVRE ALLGLEWQPD
VVLGYANHLH DNDRWPMGDA YSGISLPPVF DATLPLVPYS LQLSVAAQRD KAMALGMMHD
LLPRMPFKRR VRRALQRVLA GRHWPAEGEN EFFRKAVRRH ELFWCSRDL