Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0531 |
Symbol | |
ID | 3366007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 599742 |
End bp | 601151 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650871 |
Product | LmbE-like protein |
Protein accession | YP_233639 |
Protein GI | 66043798 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTCGCA AGCAGCAGTT GCTCAAGCGC CATCGCCGTA ACAAGCGACT GGCGTTGCTG GGTGGACTGC TCCTGCTGAT CGCGGTGGGC GTGCTGGTGG CCTGGTGGCT GGCGCCGGTG CTGGCCGTGT GTGCCTGGGT CGCCCATGAG GCCTGGTTCG CCGATCATCT GTTCTATTCG CCGTCTGACG ATTATCAGTA CACCTTTGCT GCCGACAGCG AAGTGCCGGG CGTGCGCCTC GACGGCGGCA CGTTGCTGAT CGACCCCGCA GTACAACTGA ACGGCGACGA AACGCTGATA TTGGCACTGA CGGTCAAAAG CACCTGGCTC GGGCGCTTTC TCGATCCGGT GGTCGAGCTG CAAGGTCAGG GCCTCAACGA CCAGCAGGCA TTCGAGCGCG GCGTCTGCGG CGTGCGTTAT CTGAACCTGA CCGGCCTGGG CGAGCCGTTG GCCGCAGGTG TGCTGAAACT GCGCGGGCGT TGCTGCCGCC TTGCCGGCAC ACCTCGTCTC TGGCTGTTTC GCCAACCGGA TGCGCGAAAA CAGCGTGTCA TGGTCATCGC ACCGCACGCC GATGATGCCG AGCTGGCCGC CTTCGGGCTG TACAGCCAGG CCGAGGAGGC GTGGATCATC ACGCTGACCG CCGGTGAGAT CGAGGCCGAG CATTATCGGC AGATGGGCAT GGAGCGTGCC GAAGCTGCGC GTATGAAGGG CCGCTTGCGG GCCTGGGACA GTATCGCCGT GGCGCGCTGG GGCGGGGTGC CCGAGTCGCA GTGTGTGCAA TTGGGCTATT TCTGCCTGCA ACTGCCCGCC ATGCAGGCTG CGCCGGATAC GCCTGTTGGT TCGCGGGAAG CCGATCTGAC CGATACCCGC CTGTTTCGTC AGTTCAATAC CCTGCCATTG CCCGGCGACA ACGGCCAGCC GACCTGGAAT AACCTGCTCG CCGACCTGCG CGCGCTGATT CTCAAGGCCC GGCCGCAGGT TGTGGTGATG CCGCATCCTG CCATCGACCC TCATCCCGAT CACATCTGCG CCCAGGCTGC GGTGCGTGAA GCGCTGCTCG GGCTCGAATG GCAGCCGGAC GTAGTGCTCG GTTATGCCAA TCACCTGCAC GACAACGACC GCTGGCCGAT GGGCGATGCC TACAGCGGCA TCAGCCTGCC GCCGGTCTTC GATGCCACGC TGCCGCTGGT GCCGTACAGC CTTCAATTGT CGGTCGCCGC GCAACGCGAC AAGGCCATGG CACTGGGCAT GATGCATGAC CTGCTGCCAC GCATGCCGTT CAAGCGTCGT GTGCGCCGTG CGCTGCAGCG CGTTCTGGCC GGTCGTCACT GGCCAGCCGA GGGCGAAAAC GAATTCTTCC GCAAGGCGGT GCGACGACAC GAGTTGTTCT GGTGCAGCCG TGATCTCTGA
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Protein sequence | MSRKQQLLKR HRRNKRLALL GGLLLLIAVG VLVAWWLAPV LAVCAWVAHE AWFADHLFYS PSDDYQYTFA ADSEVPGVRL DGGTLLIDPA VQLNGDETLI LALTVKSTWL GRFLDPVVEL QGQGLNDQQA FERGVCGVRY LNLTGLGEPL AAGVLKLRGR CCRLAGTPRL WLFRQPDARK QRVMVIAPHA DDAELAAFGL YSQAEEAWII TLTAGEIEAE HYRQMGMERA EAARMKGRLR AWDSIAVARW GGVPESQCVQ LGYFCLQLPA MQAAPDTPVG SREADLTDTR LFRQFNTLPL PGDNGQPTWN NLLADLRALI LKARPQVVVM PHPAIDPHPD HICAQAAVRE ALLGLEWQPD VVLGYANHLH DNDRWPMGDA YSGISLPPVF DATLPLVPYS LQLSVAAQRD KAMALGMMHD LLPRMPFKRR VRRALQRVLA GRHWPAEGEN EFFRKAVRRH ELFWCSRDL
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