Gene Psyr_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0529 
Symbol 
ID3366005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp597719 
End bp598849 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content62% 
IMG OID637650869 
Productglycosyl transferase, group 1 
Protein accessionYP_233637 
Protein GI66043796 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.61936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCT CGGTTGAACG ACACGTACTG CAGTTCTGTC ACGGTTATGA CGGGCCGTTT 
CTGGACTGCG CGCGGCAATA CGCCAGCCTG TTCGCCGGCA AGGGCTATCG GGTCACGACG
GTGTTTCTGA CCGGTGCCGC CGATCCGGAT GTCGTTGCTG ACTGCGGTTC GGACGAGGTG
CTGTTCATGG AGTACAGCTC CAGTGCCATT CGCGGCCTGA AGCTGGGCGC CATCCGTGAC
CTGCGCAAAA TTGCTGCCAC GCGCAGTTTC AGCTTCTGCA TCGCGCACCG CTTCAAGCCG
GTGTACATAG CCCTGCTGGC GACGAAGCTG CCGGTGATCG GTGTGCATCA TGCGTTCGGC
GATTACCACC GGCGCAGTCG CAAGCTGTTC GCCAACCTGT TTCGCAAGCG CCTGAGCCTG
CTTGGTGTTT CCGACGCGGT TCGCGACGAC ATGCGCAGCA GCCTGCCCAA GTGGTCGGCC
GAGCGCATTC AGACCCTGTA CAACCGGATC GATGTCGAGC AACTGCAGGG CAGTCAGTTT
TCCGCTGAAG ATGCCCGCGC AGAGTTGGGC CTGTCGGCGT CGGCCTGGAT CGTCGCCAAC
GTCGGTCGTC TGCATCCCGA CAAGGATCAG GCCACGCTGT TGCGCGGTTT TGCCGAAGCG
CTGCCCGATC TTCCCGAGAA CAGCCAGCTG GTGATTCTCG GCAAGGGGCG TCTGGAAGAA
GACCTCAAGG CCCTGGCGCT GGAACTGGGC ATCGGTCCGC AGGTGCTGTT CCTTGGGCAA
GTGCCTGACG CGCGCCGCTA CTTCAAGGCC TTCGACGTGT TCGCCTTGAG CTCGGACCAC
GAACCGTTCG GCATGGTCCT GCTGGAGGCG ATGGTCGCCG GTGTGCCGCT GGTTGCAACC
TCATGCGGCG GCGCCAAGGA AGTGGTTGAA GACGTTGGCC TGTTGTTCCC GCTGGGTGAC
GTGCATAGCC TGGCACACGG CCTGGTGCAC ATGGCCGGTC TCGATGCCGA ACAACGTCAG
GATTGTGCCA AGCGCATGCT GTTGCGCTTG CGCGAACGTT TTTCCGATCA CGCTGTGCGT
AATGTCTTCT GGCGTCTGCC ACAAGTCTCC AGCCTGACAG CGGGGGCCTG A
 
Protein sequence
MTRSVERHVL QFCHGYDGPF LDCARQYASL FAGKGYRVTT VFLTGAADPD VVADCGSDEV 
LFMEYSSSAI RGLKLGAIRD LRKIAATRSF SFCIAHRFKP VYIALLATKL PVIGVHHAFG
DYHRRSRKLF ANLFRKRLSL LGVSDAVRDD MRSSLPKWSA ERIQTLYNRI DVEQLQGSQF
SAEDARAELG LSASAWIVAN VGRLHPDKDQ ATLLRGFAEA LPDLPENSQL VILGKGRLEE
DLKALALELG IGPQVLFLGQ VPDARRYFKA FDVFALSSDH EPFGMVLLEA MVAGVPLVAT
SCGGAKEVVE DVGLLFPLGD VHSLAHGLVH MAGLDAEQRQ DCAKRMLLRL RERFSDHAVR
NVFWRLPQVS SLTAGA