Gene Psyr_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0522 
Symbol 
ID3365998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp584499 
End bp585620 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content61% 
IMG OID637650862 
Productglycosyl transferase, group 1 
Protein accessionYP_233630 
Protein GI66043789 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.62557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGG CTTTTGTACT CTACAAATAC TTCCCGTTCG GTGGCCTGCA ACGCGACTTC 
ATGCGCATCG CGCTGGAGTG TCAGCAGCGC GGTCATCAGG TCCGTGTCTA TACCCTGATC
TGGGAAGGCG ATGTGCCGCC CGGTTTCGAG GTGCTGGTGG CGCCGGTCAA GGCGTTCTTC
AACCATCGGC GCAACGAAAA GCTCAGTGCC TGGATGGAGG CGGACCTGGC CAAACGCCCG
GTGGACCGCC TGATCGGTTT CAACAAGATG CCCGGTCTGG ATGTGTATTA CGCCGCCGAC
GGCTGCTTCG AGGACAAGGC GCAGAACCTG CGCAGCCCGC TCTATCGCAA GTGGGGCCGT
TACCGCCACT TTGCCGACTA CGAGCGCGCA GTGTTTGCCA GGGACTCGAA AACCCAGGTG
TTGATGATCT CCGAAGTGCA GCAGCCGCTG TTCATCAAGC ATTACGACAC CCCGCCGTCG
CGCTTCCATT TGCTGCCGCC GGGTATTTCC CAGGATCGCC GCGCGCCGCC GGATGCACCT
GACATTCGTG CAGGCTTTCG CAAGGAATTC GGCCTTGCCG ACGATGACCT GTTATTGGTG
CAGATCGGCT CCGGTTTCAA GACCAAGGGC GTGGATCGCA GCCTCAAGGC GCTCGCGGCT
CTGCCTGCCG AGCTGAAGAA GCGCACGCGA CTGTTTGTAA TCGGTCAGGA CGATCCCAAA
GTATTCCAAC TGCAGAGCGC GGCGCTCGGC CTGGGTGATC AGGTGACCTT TATGAAAGGG
CGCAGCGATA TTCCGCGTTT TCTGCTGGGC TCCGACCTGC TGATTCATCC GGCCTACAAC
GAAAACACCG GGACCGTGCT GCTCGAAGCG CTGGTTGCCG GTTTGCCGGT CCTGGTCAGC
GCGGTCTGTG GTTACGCTCA CTATATTGCC GAGGCCGATT GCGGGCGGGT GCTGGATGAG
CCGTTCGATC AGGCGCAGCT CAATCGCTAC CTGTCGGAGA TGCTTCTGGA CAACGCCGCA
CGCAGCGCGT GGTCGCGCAA CGGCCTGACC TTTGCCGACA CGGCAGACCT TTACAGCATG
CCGCAACACG CTGCGGATGT GATTCTGGCG GAGCACTATT GA
 
Protein sequence
MQLAFVLYKY FPFGGLQRDF MRIALECQQR GHQVRVYTLI WEGDVPPGFE VLVAPVKAFF 
NHRRNEKLSA WMEADLAKRP VDRLIGFNKM PGLDVYYAAD GCFEDKAQNL RSPLYRKWGR
YRHFADYERA VFARDSKTQV LMISEVQQPL FIKHYDTPPS RFHLLPPGIS QDRRAPPDAP
DIRAGFRKEF GLADDDLLLV QIGSGFKTKG VDRSLKALAA LPAELKKRTR LFVIGQDDPK
VFQLQSAALG LGDQVTFMKG RSDIPRFLLG SDLLIHPAYN ENTGTVLLEA LVAGLPVLVS
AVCGYAHYIA EADCGRVLDE PFDQAQLNRY LSEMLLDNAA RSAWSRNGLT FADTADLYSM
PQHAADVILA EHY