| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0517 |
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| Symbol | |
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| ID | 3365993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 574465 |
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| End bp | 576138 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637650857 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_233625 |
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| Protein GI | 66043784 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.153939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGT TAATTCGTGT ACCCGACATC GGCAACGGTG AAGGCGAAGT CATTGAATTG
ATGGTCAAGG TCGGTGATCG CATCGAAGCC GACCAGAGCG TTCTGACGCT TGAGTCGGAC
AAGGCGAGCA TGGAAATCCC TGCTCCCAAG GCTGGCGTCA TCAAGACCAT GAAGGTCAAG
CTGGGTGACC GCCTGAAAGA AGGCGACGAG CTGTTCGAAC TGGAAGTGGA AGGCGAAGCG
GCTGCGGCTG CGGCCCCTGC TGCCGAACCT GCCCCTGCCC CTGCCCCTGC CCCTGCCCCT
GCTGCTGCCG AAAAGCCGGC TGAAGCGGCA CCTGCACCTG CGGCCGCCGC CGAGCCTGCT
CCGGCAGCCA GCGCCAGCGT TCAGGACATC CACGTACCGG ACATCGGTTC GTCGGGCAAG
GCCAAGATCA TCGAACTGAT GGTCAAGGTC GGTGACAGCA TCCAGGCCGA TCAGTCGCTG
ATCACCCTTG AATCCGACAA GGCCAGCATG GAGATCCCTT CTCCGGCAGC AGGCGTTGTC
GAGAGCATCG AAGTCAAGCT GGACCAGGAA GTCGGTACCG GCGACCTGAT CCTGAAACTG
AAAGTCGAAG GCGCCGCGCC TGCCGCTGCT CCGGCGCCTG CCGCCAGCGC ACCCGCCGCG
GCCCCGGCCA AGGCTGAGGC CGCGGCTCCA GCTGCCCCTG CTCCCAAAGC AGAAGCAGCA
CCTGCGCCAG CGGCTCCAGC GGCTCCGGCC AAAGACGGTG CCAAGGTTCA TGCCGGCCCG
GCCGTTCGTC AGCTGGCCCG CGAATTTGGC GTCGAGCTGA ACGCTGTCAG CGCCACCGGC
CCGCACGGCC GTGTGCTGAA AGAAGACGTT CAGGCTTACG TCAAAACCAT GATGCAGAAG
GCCAAGGAAG CTCCAGCTGG CGGCGCAAGC GGCGGCTCGG GCATCCCGCC GATTCCGGAA
GTCGATTTCA GCCGTTTCGG CGAGATCGAA GAAGTACCGA TGACGCGCCT GATGCAACTC
GGCGCTTCCG GCCTGCACCG CAGCTGGCTG AACATTCCGC ACGTCACGCA GTTCGACCAG
GCCGACATTA CCGACCTGGA AGCTTTCCGT GTGGCGCAGA AAGGCGCTGC CGAGAAGGCT
GGCGTCAAGC TGACGGTCCT GCCGCTGCTG CTCAAATCCT GCGCCCACCT GCTCAAGGAG
CTGCCGGACT TCAACGCTTC GCTGGCGCCT AGCGGCAAGG CCGTGATTCG CAAGAAGTAC
GTGCACATCG GCTTTGCCGT GGACACCCCG GACGGCCTGC TGGTCCCGGT CATCCGCGAC
GTCGACCAGA AGAGCCTGTT GCAACTGGCC GCCGAAGCCG CCGCACTGGC GGAAAAGGCG
CGCAACAAGA AACTGACGGC GAACGACATG CAGGGCGCGT GCTTCACCAT CTCCAGCCTC
GGCCACATTG GCGGCACCGG CTTCACGCCG ATCGTCAACG CGCCGGAAGT GGCGATCCTC
GGTGTTTCCA AGGCAACCAT CCAGCCCGTC TGGGACGGCA AAGCCTTCCA GCCGAAACTG
ATGCTGCCGC TGTCGCTGTC CTATGATCAC CGCGTGATCA ACGGCGCAGC TGCTGCCCGC
TTCACCAAGC GCTTGAGCGA ATTGCTGGCG GACATCCGCA CAATCCTGCT GTAA
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| Protein sequence | MSELIRVPDI GNGEGEVIEL MVKVGDRIEA DQSVLTLESD KASMEIPAPK AGVIKTMKVK
LGDRLKEGDE LFELEVEGEA AAAAAPAAEP APAPAPAPAP AAAEKPAEAA PAPAAAAEPA
PAASASVQDI HVPDIGSSGK AKIIELMVKV GDSIQADQSL ITLESDKASM EIPSPAAGVV
ESIEVKLDQE VGTGDLILKL KVEGAAPAAA PAPAASAPAA APAKAEAAAP AAPAPKAEAA
PAPAAPAAPA KDGAKVHAGP AVRQLAREFG VELNAVSATG PHGRVLKEDV QAYVKTMMQK
AKEAPAGGAS GGSGIPPIPE VDFSRFGEIE EVPMTRLMQL GASGLHRSWL NIPHVTQFDQ
ADITDLEAFR VAQKGAAEKA GVKLTVLPLL LKSCAHLLKE LPDFNASLAP SGKAVIRKKY
VHIGFAVDTP DGLLVPVIRD VDQKSLLQLA AEAAALAEKA RNKKLTANDM QGACFTISSL
GHIGGTGFTP IVNAPEVAIL GVSKATIQPV WDGKAFQPKL MLPLSLSYDH RVINGAAAAR
FTKRLSELLA DIRTILL
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