| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0516 |
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| Symbol | |
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| ID | 3365992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 572766 |
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| End bp | 574187 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637650856 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_233624 |
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| Protein GI | 66043783 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACACT ACGCGACATT TTTGTTTTGC AGGTCCACCG TCGTGACTAA CACCGCTTTC
AATTCCCTGC CTCTGTCCGC TGCCATGCTG GCTAACCTGG AGTCGCTTGG TTATGCCGAA
ATGACACCGA TTCAGGCGCA GAGCCTGCCG GTGATCCTCA AGGGCATGGA CCTGATCGCG
CAAGCCAAGA CCGGCAGCGG CAAGACCGCT GCGTTCGGCA TCGGCCTGCT CAACCCGATC
AACCCGCGTT TCTTCGGTTG TCAGGCACTG GTCATGTGTC CGACCCGCGA ACTGGCGGAT
CAGGTGGCCA AGGAAATCCG CCGTCTGGCG CGTTCCGAGG ACAACATCAA GGTCCTGACC
CTGTGTGGCG GCGTGTCCTT TGGCCCGCAG ATCGGCTCGC TGGAACATGG CGCACACATC
ATCGTCGGCA CTCCGGGTCG TATACAGCAG CACTTGCGCA AGGGCTCGCT GGTCCTGGAC
GGCCTGAACA CGCTGATTCT CGATGAAGCC GACCGCATGC TGGACATGGG CTTCTACGAC
GCCATCGCCG ACATCATCGA GCAGACTCCG CAGCGCCGTC AGACCCTGCT GTTCTCCGCC
ACCTACCCGG TCGGCATCAA GCAGTTGTCC TCGAAGTTCA TGCGTGATCC GCAGACCGTC
AAGGTCGAAG CGCTGCACGC CGACAGCCAG ATCGAGCAGA TTTTCTACGA GATCTCCCCG
GAGCAGCGCC TGGAAGCGGT GGTCAAGGTA CTCGGCCATT TCCGTCCGAC GTCCTGCGTG
GCGTTCTGCT TCACCAAGCA GCAGGTCCAG GAAGTGGTCG ATCACCTGAC CGCCAAGGGC
ATGTCTGCTG TCGGCCTGCA TGGTGATCTG GAACAGCGTG ACCGTGATCA GGTACTGGCG
ATGTTCGCCA ACCGCAGTAC CTCGGTACTG GTCGCCACGG ACGTAGCCGC GCGCGGTCTG
GATATCGACG CGCTGGACAT GGTGATCAAC GTCGAGCTGG CGCGTGATTC GGAAATCCAC
ATCCACCGCG TCGGCCGCAC CGGTCGTGCC GGCGAGAAAG GCATCGCGGT CAGCCTCGTG
GCCCCGTCGG AAAGCCAGCG CGCCCGTGCC ATCGAAGAAT TGCAGAAAGC GCCGTTGAAC
TGGCAGCAAT ACGACAGACT GAGCATCAAG GAAGGCGGCA AGCTGCTGCC CGCCATGACC
ACGCTGTGCA TCGGCTCGGG CCGCAAGGAC AAGCTGCGTC CAGGCGACAT CCTCGGCGCA
CTGACCGGCG AGGCAGGCAT TGCGGGCACT CAGGTCGGCA AGATCGCGAT TTTCGACTTC
CAGGCCTACG TTGCCGTCGA GCGCAGCATG GCCAAACAGG CCCTGGAGCG TTTGAACAAT
GGCAAGATCA AGGGCAAGTC GCTGCGCGTG CGGATTTTGT AA
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| Protein sequence | MIHYATFLFC RSTVVTNTAF NSLPLSAAML ANLESLGYAE MTPIQAQSLP VILKGMDLIA
QAKTGSGKTA AFGIGLLNPI NPRFFGCQAL VMCPTRELAD QVAKEIRRLA RSEDNIKVLT
LCGGVSFGPQ IGSLEHGAHI IVGTPGRIQQ HLRKGSLVLD GLNTLILDEA DRMLDMGFYD
AIADIIEQTP QRRQTLLFSA TYPVGIKQLS SKFMRDPQTV KVEALHADSQ IEQIFYEISP
EQRLEAVVKV LGHFRPTSCV AFCFTKQQVQ EVVDHLTAKG MSAVGLHGDL EQRDRDQVLA
MFANRSTSVL VATDVAARGL DIDALDMVIN VELARDSEIH IHRVGRTGRA GEKGIAVSLV
APSESQRARA IEELQKAPLN WQQYDRLSIK EGGKLLPAMT TLCIGSGRKD KLRPGDILGA
LTGEAGIAGT QVGKIAIFDF QAYVAVERSM AKQALERLNN GKIKGKSLRV RIL
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