Gene Psyr_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0515 
Symbol 
ID3365991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp571412 
End bp572590 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content61% 
IMG OID637650855 
Producthypothetical protein 
Protein accessionYP_233623 
Protein GI66043782 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTTA CTGACGTTGT AATCATTGGC GCCGGCGCTG CCGGTCTGAT GTGTGCGTTC 
ACCGCTGCCG CTCGCGGGCG CAAGGTGATG TTGATCGACC ACGCCAACAA ACCCGGCAAG
AAGATCCTGA TGTCCGGTGG CGGGCGGTGC AACTTCACCA ATATGTACAC CGAGCCGGCC
AACTTCCTGT CGCAGAACCC GCATTTCTGC AAATCGGCCC TGGCCCGCTA CACCCAATGG
GATTTCATCG CGATGGTCGC CAAACATGGC GTGCCTTATC ACGAGAAAAA GCTCGGCCAG
CTGTTTTGCG ACAACAAGTC CAGCGACATT CTGGAAATGC TTCTGGAAGA ATGCCGACAA
GCCGGTGTCA GCCTGCACAT GGACACCGCC GTGCAGCAGA TCGAAAAAAC CGACGACGGC
TACAGCCTGC AGACCACGCT GGGCACCCTG AACTGCCAGT CGCTGGTGAT TGCCACGGGC
GGGCTGTCGA TTCCGACGCT GGGCGCCACC GGTTTTGGCT ATCAGGTCGG CAAGCAGTTC
GGCCACACGC TGCTGCCGAC CCGTGCCGGG CTGGTGCCGT TCACCATCAC CGATCAGCTC
AAGGAGCTGT GCACCGAGCT GTCAGGCACC TCGGTGGATT GCCTGGTGAG CTGCAACGAC
ACCAGCTTCC GCGAAAACAT CCTGTTCACC CACCGCGGCC TCAGTGGCCC GGCGATCCTG
CAGATTTCCT CGTTCTGGCA GCCCGGCGAC ACCGTGGAAA TCAACCTGCT GCCCGATCAT
GACGTGCCCG CCTGGCTCAA CCAGCAGCAG GCCGAGCGCC CCAACAGTGA ACTGAAAACC
CTGCTGGGCG AGATTTTCAC CAAGAAGATG GCCAACCTGA TCGCCGAACA CTGGTTCGTT
TCCAGACCGA TGAAGCAGTA CACCCACGCC GAACTGGCCG AGATCGCCGA AAAGCTGGCG
AGCTGGCAGG TGGTCCCGGC GGGCACCGAG GGTTATCGCA CGGCCGAAGT GACGCTGGGC
GGTATCGACA CCCGCGAAGT GTCGTCCAAG ACCATGGAAT CGCTGAAATC CCCCGGTCTT
TATTTCGTGG GCGAAGTGCT CGACGTGAGC GGTCATCTGG GCGGTTTCAA CTTTCAGTGG
GCGTGGGCCT CGGCCTATGC TGCCGCACAC TACGTGTGA
 
Protein sequence
MPVTDVVIIG AGAAGLMCAF TAAARGRKVM LIDHANKPGK KILMSGGGRC NFTNMYTEPA 
NFLSQNPHFC KSALARYTQW DFIAMVAKHG VPYHEKKLGQ LFCDNKSSDI LEMLLEECRQ
AGVSLHMDTA VQQIEKTDDG YSLQTTLGTL NCQSLVIATG GLSIPTLGAT GFGYQVGKQF
GHTLLPTRAG LVPFTITDQL KELCTELSGT SVDCLVSCND TSFRENILFT HRGLSGPAIL
QISSFWQPGD TVEINLLPDH DVPAWLNQQQ AERPNSELKT LLGEIFTKKM ANLIAEHWFV
SRPMKQYTHA ELAEIAEKLA SWQVVPAGTE GYRTAEVTLG GIDTREVSSK TMESLKSPGL
YFVGEVLDVS GHLGGFNFQW AWASAYAAAH YV