Gene Psyr_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0513 
Symbol 
ID3365989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp568358 
End bp569113 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content58% 
IMG OID637650853 
Productextracellular solute-binding protein 
Protein accessionYP_233621 
Protein GI66043780 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGT TGCTTCGAGC GGTGGGGGTG CTGGTCTTTC TGCTGATGGC GCACGTCAAC 
GCAGCTGAAA AGTTGCGTCT TGTCGCCGAT CCCTGGCCAC CTTTTACCGA CGCGCTGCTG
CTCAACGGCG GGCTGGCAAC CGATATCGTC AATACGGCGC TGCGCCGTGC CGGGTACACC
ACGCTGTATG AGCAAGTGCC CTGGGCACGG GCGATGCTGG GTTTGAGCCA AGGGCGTCAT
GATGTGCTGA TCAATGCGTG GTTCAGCGAT GAACGTACGA AAATTGGCCA GTTTTCTGCG
CAATACCTGC TCAACCGGAT ACGTTTCATC AAGCGCAAGG AGTCGCCCAT TGGCACCCTG
ACCCATGAGC AGCTCCACCA ATACGTGATC GCGGTGGTCA GGGGTTATGC TTATGCCCCT
GCGTTTGACA GCGACAGCCA GTTGCAGAAG GTCCCTGTGC AGAACTTCTC CACCGCCATA
CGCATGCTCG CCGCCGAGCG TGTCGACCTG ACCCTGGAAG ATGAGTACGT AGCCCGTTAC
AACCTGGCGA TGGAACGGGA TGAGGTGCGT GACCGGGTCG AGTTTCTACC GGGCTCGTTG
AGCGAGAACA GCCTGCATAT TCTGGTCAGC CTGAAAAATC CCCACCACGA CAAGATCGTC
GCCGACTTTG ATCGCGAAAT TGCCGCTATG AAAGCCGACG GCACCTACGA TGAGCTGCTC
AGACTGCATG GGTTGCAGCA ACCTCCGGAG CTTTGA
 
Protein sequence
MSQLLRAVGV LVFLLMAHVN AAEKLRLVAD PWPPFTDALL LNGGLATDIV NTALRRAGYT 
TLYEQVPWAR AMLGLSQGRH DVLINAWFSD ERTKIGQFSA QYLLNRIRFI KRKESPIGTL
THEQLHQYVI AVVRGYAYAP AFDSDSQLQK VPVQNFSTAI RMLAAERVDL TLEDEYVARY
NLAMERDEVR DRVEFLPGSL SENSLHILVS LKNPHHDKIV ADFDREIAAM KADGTYDELL
RLHGLQQPPE L