Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0513 |
Symbol | |
ID | 3365989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 568358 |
End bp | 569113 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650853 |
Product | extracellular solute-binding protein |
Protein accession | YP_233621 |
Protein GI | 66043780 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGT TGCTTCGAGC GGTGGGGGTG CTGGTCTTTC TGCTGATGGC GCACGTCAAC GCAGCTGAAA AGTTGCGTCT TGTCGCCGAT CCCTGGCCAC CTTTTACCGA CGCGCTGCTG CTCAACGGCG GGCTGGCAAC CGATATCGTC AATACGGCGC TGCGCCGTGC CGGGTACACC ACGCTGTATG AGCAAGTGCC CTGGGCACGG GCGATGCTGG GTTTGAGCCA AGGGCGTCAT GATGTGCTGA TCAATGCGTG GTTCAGCGAT GAACGTACGA AAATTGGCCA GTTTTCTGCG CAATACCTGC TCAACCGGAT ACGTTTCATC AAGCGCAAGG AGTCGCCCAT TGGCACCCTG ACCCATGAGC AGCTCCACCA ATACGTGATC GCGGTGGTCA GGGGTTATGC TTATGCCCCT GCGTTTGACA GCGACAGCCA GTTGCAGAAG GTCCCTGTGC AGAACTTCTC CACCGCCATA CGCATGCTCG CCGCCGAGCG TGTCGACCTG ACCCTGGAAG ATGAGTACGT AGCCCGTTAC AACCTGGCGA TGGAACGGGA TGAGGTGCGT GACCGGGTCG AGTTTCTACC GGGCTCGTTG AGCGAGAACA GCCTGCATAT TCTGGTCAGC CTGAAAAATC CCCACCACGA CAAGATCGTC GCCGACTTTG ATCGCGAAAT TGCCGCTATG AAAGCCGACG GCACCTACGA TGAGCTGCTC AGACTGCATG GGTTGCAGCA ACCTCCGGAG CTTTGA
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Protein sequence | MSQLLRAVGV LVFLLMAHVN AAEKLRLVAD PWPPFTDALL LNGGLATDIV NTALRRAGYT TLYEQVPWAR AMLGLSQGRH DVLINAWFSD ERTKIGQFSA QYLLNRIRFI KRKESPIGTL THEQLHQYVI AVVRGYAYAP AFDSDSQLQK VPVQNFSTAI RMLAAERVDL TLEDEYVARY NLAMERDEVR DRVEFLPGSL SENSLHILVS LKNPHHDKIV ADFDREIAAM KADGTYDELL RLHGLQQPPE L
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