Gene Psyr_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0504 
Symbol 
ID3365980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp552941 
End bp555589 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content58% 
IMG OID637650844 
Producthypothetical protein 
Protein accessionYP_233612 
Protein GI66043771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.659595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTC TCACACAGGA AGACGTTATG TCACCCCCAC CCTCGCAAGC CTCCAAAACC 
GATCAGCAAC TGCTGCGCGA ACGTGCGCAG CAGTTTGTTC TCGACTATCC CGATCTGCAC
GATCTGGCCT ATATCGCAGC CAGCAAGATC ATTCTTCAAC ACACCCACAG GATGTTCAAT
CCTGAAAAGG TGTACTGGCA TCGTTTCGGT TCCGCCAGCA GCAGCCCGCG TACCTTCACC
GGCTGGCAGC ATTCCGGAAA GCCTGTGCAG TCGATGACGT TGATCGAGCT GCTCATTAAG
CACTTCAGCG CCCACGACCA GGAAGCCAGC GATGAGCTCT CCCTGTACGG TGGTTTTTAT
ACCGATGGCC CGGACCACGG GTTTTTCGAC GAGCGCAATG AGGTGCCCAT GCTGCCTCAG
GATGTGCTCA ACGACATGTG GACGCTTGAT TTCAGTTCGT TGTACAGCCG CCGAATGGAG
CGCTTCTGGA ACACCCACAG TGACAACTTT TGCATTCTGG CCAAGGCGCA ATATCTGGTT
GCCGCCGGCC ATTGCCTGCG CAAGGGCCAA CTGTCACCCG ACGACTTCAA ACAGGTCACC
CGCGTCGTTA TTGCCGATCC ATTGCAAACG CCTACGCTGA AAGCGTTGCA GGAGCCGCTG
CCGTTGCCGC CCGGTGTGTC GGTACATACG CTGGATATCG ACGGCATCAA GGCCCACGAC
CTGCTGCGTA TCGTCATTGC CGGTGGGCGG GAGGTGATTT ACTGGCCTGA TGCCGAACAG
CCTTTTATGG CGTTCGACAG CGAGCGCGCC TTGTACCACT GGCTCAAGGA ACAGTTCATG
GGCGAGCAGG CAGCCAAGGC GATGACAGGC CATTTCCTGC GTGGTGAGGC GTCCCGGACA
CAAGATGGCG CCAGGTTTGC GCGCGCGGTG AGCGATTTGC TCGCGCACGA TTGGCGTGCT
GACGTTCGAC TCATCAACCA GTCGCAAGCG CCTATTGCAG GGGATCCCTT TGTTTACCTG
CGTGACGTTG CCCGGCAGGC AATGAGCGCC GATGCACGCG AGATCCTGAC GTCCAATACC
GACCTGCTCA AGCAGATATG GATCGGCTAT CTGAGCGCAT TCCTGCGGGC GTTTGGCGGG
CTTGCGCCGC TGAGCTGGCC GGTTGCTTTG ACGCTTGTCG GGGCAAGTCT TGCCAATACC
GGGTTGAATA TTGATCAGGC GGTCAATGGC AAAACCCCTG CGCAACGCAA GGCTGGTGTG
CTGGGCGCGA TTCTCAACAC GCTTTATCTA CTCTTCAATC TTCCTCTGCT GATGTCCATA
CGTGTCGCTC CCCAGCCTTT ACAGGTAACG ACAACGGACG TCGCATCGAT CTCCAGTGAG
GCCCTGGAGG GCGGCAGCGT GCTTGCCGAC CCGCTGGATA ACATGGAAGG CAACCTGCTG
CTCGACACCC TCACGCCCTC AGCCGAAGAG GGCAGGTTGC GCGGCGTCTA CACGCTGGGT
AACGGCGAAA CCTGGATCAA GCTGGCGCAC TTGCCTTATC GCGTAATGTT CAATGAGCAA
CAGCAGTGCT GGATGGTCGT CAATCCTGAT AACCCGTTTG CGTTCATCGG CAGCAAGCCG
GTTCGTCTGA ACGCCGAAGG GAAATGGACG CTGATGGCGT CGCCCGGCTT GCAGGGCGGC
TCTCCTATGG ATGTGCAGAT TCCGTCAGGC AGCGCATCTG CCCCGGTTGG CAAACCTTAT
GCGACAGTAG GTTCCTCGTT CTGGGACCGG TATTTGCAAA CTGACATTTT CAATGAGCAG
CACTTTGCAG AAACAGCTCT GGCCCGGCAG AAACAGGTCA TGTCAATCTG GGACGCGACC
CCGGAGGATG TCCTGGAGTC CGATTCTTCG CCCGATGGCA ACGAGGTATA CAGGGACCCC
TGGCAGGGCA AACATCGGGT TTTCAAGCTT GGTGATGACG ACTATTACGC CGCCAACATC
ACGCTGTATA CCCAGGATGA TGCGCAATTC AACAGGTTCC TGCGTACCGG TGAGAGCCTG
GGCCGAAACC AGGTCAGAGC CATCGAACGC CTGGCCGATG ACATCCATGT GGTGGGGTAC
AACAATGATG TCGAGTTGTA CCGTGGCGGC AGTGGTGATC GGGGCACCTC GGGTGCCGTG
TTCCGCAGCG GGCAGATCAA GGTCGGCGAC GTGCTGGTCA ATACCGATGT CACCTCGTTC
AGCGAAAACC CCTATGTGGT CAGCGCCTTT GCCAGCAGTC GGGCCGGTGC GCCCGCTAGC
GCCATGCTTG GGCCGGTCAC GTTCGATGAC ACCTCGGTGG TCTTCGTTTT GCCCAAAGGG
CGTTATCTGC GGGCCACGCC TGTTGCGCCA TTCTCGGCCT CGCCCGATGA GGCCGAATCG
ATCTTCTTGC CCGGATGCTA CTTTCAGATC GACAGCATCG AAGAAGTGAG CGGTGAGTTT
TATCGCATCA TGAAAGTCCA GATGCAGGAG GTCGATCGTC CAATCCAGGG GCGGGCGCTT
TACGATATGC GCACGGGCGA GCCATTCAGT CGAGAGCAGT ACGCGCTTAA GCTGGGGACA
GATGCCAAGG TACTGGTCGA CCGGTTTTTT CCGCAGAATC CAATGACAGA CCTGTTCAGC
CCGCGCTGA
 
Protein sequence
MTSLTQEDVM SPPPSQASKT DQQLLRERAQ QFVLDYPDLH DLAYIAASKI ILQHTHRMFN 
PEKVYWHRFG SASSSPRTFT GWQHSGKPVQ SMTLIELLIK HFSAHDQEAS DELSLYGGFY
TDGPDHGFFD ERNEVPMLPQ DVLNDMWTLD FSSLYSRRME RFWNTHSDNF CILAKAQYLV
AAGHCLRKGQ LSPDDFKQVT RVVIADPLQT PTLKALQEPL PLPPGVSVHT LDIDGIKAHD
LLRIVIAGGR EVIYWPDAEQ PFMAFDSERA LYHWLKEQFM GEQAAKAMTG HFLRGEASRT
QDGARFARAV SDLLAHDWRA DVRLINQSQA PIAGDPFVYL RDVARQAMSA DAREILTSNT
DLLKQIWIGY LSAFLRAFGG LAPLSWPVAL TLVGASLANT GLNIDQAVNG KTPAQRKAGV
LGAILNTLYL LFNLPLLMSI RVAPQPLQVT TTDVASISSE ALEGGSVLAD PLDNMEGNLL
LDTLTPSAEE GRLRGVYTLG NGETWIKLAH LPYRVMFNEQ QQCWMVVNPD NPFAFIGSKP
VRLNAEGKWT LMASPGLQGG SPMDVQIPSG SASAPVGKPY ATVGSSFWDR YLQTDIFNEQ
HFAETALARQ KQVMSIWDAT PEDVLESDSS PDGNEVYRDP WQGKHRVFKL GDDDYYAANI
TLYTQDDAQF NRFLRTGESL GRNQVRAIER LADDIHVVGY NNDVELYRGG SGDRGTSGAV
FRSGQIKVGD VLVNTDVTSF SENPYVVSAF ASSRAGAPAS AMLGPVTFDD TSVVFVLPKG
RYLRATPVAP FSASPDEAES IFLPGCYFQI DSIEEVSGEF YRIMKVQMQE VDRPIQGRAL
YDMRTGEPFS REQYALKLGT DAKVLVDRFF PQNPMTDLFS PR