Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0504 |
Symbol | |
ID | 3365980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 552941 |
End bp | 555589 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637650844 |
Product | hypothetical protein |
Protein accession | YP_233612 |
Protein GI | 66043771 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.659595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTC TCACACAGGA AGACGTTATG TCACCCCCAC CCTCGCAAGC CTCCAAAACC GATCAGCAAC TGCTGCGCGA ACGTGCGCAG CAGTTTGTTC TCGACTATCC CGATCTGCAC GATCTGGCCT ATATCGCAGC CAGCAAGATC ATTCTTCAAC ACACCCACAG GATGTTCAAT CCTGAAAAGG TGTACTGGCA TCGTTTCGGT TCCGCCAGCA GCAGCCCGCG TACCTTCACC GGCTGGCAGC ATTCCGGAAA GCCTGTGCAG TCGATGACGT TGATCGAGCT GCTCATTAAG CACTTCAGCG CCCACGACCA GGAAGCCAGC GATGAGCTCT CCCTGTACGG TGGTTTTTAT ACCGATGGCC CGGACCACGG GTTTTTCGAC GAGCGCAATG AGGTGCCCAT GCTGCCTCAG GATGTGCTCA ACGACATGTG GACGCTTGAT TTCAGTTCGT TGTACAGCCG CCGAATGGAG CGCTTCTGGA ACACCCACAG TGACAACTTT TGCATTCTGG CCAAGGCGCA ATATCTGGTT GCCGCCGGCC ATTGCCTGCG CAAGGGCCAA CTGTCACCCG ACGACTTCAA ACAGGTCACC CGCGTCGTTA TTGCCGATCC ATTGCAAACG CCTACGCTGA AAGCGTTGCA GGAGCCGCTG CCGTTGCCGC CCGGTGTGTC GGTACATACG CTGGATATCG ACGGCATCAA GGCCCACGAC CTGCTGCGTA TCGTCATTGC CGGTGGGCGG GAGGTGATTT ACTGGCCTGA TGCCGAACAG CCTTTTATGG CGTTCGACAG CGAGCGCGCC TTGTACCACT GGCTCAAGGA ACAGTTCATG GGCGAGCAGG CAGCCAAGGC GATGACAGGC CATTTCCTGC GTGGTGAGGC GTCCCGGACA CAAGATGGCG CCAGGTTTGC GCGCGCGGTG AGCGATTTGC TCGCGCACGA TTGGCGTGCT GACGTTCGAC TCATCAACCA GTCGCAAGCG CCTATTGCAG GGGATCCCTT TGTTTACCTG CGTGACGTTG CCCGGCAGGC AATGAGCGCC GATGCACGCG AGATCCTGAC GTCCAATACC GACCTGCTCA AGCAGATATG GATCGGCTAT CTGAGCGCAT TCCTGCGGGC GTTTGGCGGG CTTGCGCCGC TGAGCTGGCC GGTTGCTTTG ACGCTTGTCG GGGCAAGTCT TGCCAATACC GGGTTGAATA TTGATCAGGC GGTCAATGGC AAAACCCCTG CGCAACGCAA GGCTGGTGTG CTGGGCGCGA TTCTCAACAC GCTTTATCTA CTCTTCAATC TTCCTCTGCT GATGTCCATA CGTGTCGCTC CCCAGCCTTT ACAGGTAACG ACAACGGACG TCGCATCGAT CTCCAGTGAG GCCCTGGAGG GCGGCAGCGT GCTTGCCGAC CCGCTGGATA ACATGGAAGG CAACCTGCTG CTCGACACCC TCACGCCCTC AGCCGAAGAG GGCAGGTTGC GCGGCGTCTA CACGCTGGGT AACGGCGAAA CCTGGATCAA GCTGGCGCAC TTGCCTTATC GCGTAATGTT CAATGAGCAA CAGCAGTGCT GGATGGTCGT CAATCCTGAT AACCCGTTTG CGTTCATCGG CAGCAAGCCG GTTCGTCTGA ACGCCGAAGG GAAATGGACG CTGATGGCGT CGCCCGGCTT GCAGGGCGGC TCTCCTATGG ATGTGCAGAT TCCGTCAGGC AGCGCATCTG CCCCGGTTGG CAAACCTTAT GCGACAGTAG GTTCCTCGTT CTGGGACCGG TATTTGCAAA CTGACATTTT CAATGAGCAG CACTTTGCAG AAACAGCTCT GGCCCGGCAG AAACAGGTCA TGTCAATCTG GGACGCGACC CCGGAGGATG TCCTGGAGTC CGATTCTTCG CCCGATGGCA ACGAGGTATA CAGGGACCCC TGGCAGGGCA AACATCGGGT TTTCAAGCTT GGTGATGACG ACTATTACGC CGCCAACATC ACGCTGTATA CCCAGGATGA TGCGCAATTC AACAGGTTCC TGCGTACCGG TGAGAGCCTG GGCCGAAACC AGGTCAGAGC CATCGAACGC CTGGCCGATG ACATCCATGT GGTGGGGTAC AACAATGATG TCGAGTTGTA CCGTGGCGGC AGTGGTGATC GGGGCACCTC GGGTGCCGTG TTCCGCAGCG GGCAGATCAA GGTCGGCGAC GTGCTGGTCA ATACCGATGT CACCTCGTTC AGCGAAAACC CCTATGTGGT CAGCGCCTTT GCCAGCAGTC GGGCCGGTGC GCCCGCTAGC GCCATGCTTG GGCCGGTCAC GTTCGATGAC ACCTCGGTGG TCTTCGTTTT GCCCAAAGGG CGTTATCTGC GGGCCACGCC TGTTGCGCCA TTCTCGGCCT CGCCCGATGA GGCCGAATCG ATCTTCTTGC CCGGATGCTA CTTTCAGATC GACAGCATCG AAGAAGTGAG CGGTGAGTTT TATCGCATCA TGAAAGTCCA GATGCAGGAG GTCGATCGTC CAATCCAGGG GCGGGCGCTT TACGATATGC GCACGGGCGA GCCATTCAGT CGAGAGCAGT ACGCGCTTAA GCTGGGGACA GATGCCAAGG TACTGGTCGA CCGGTTTTTT CCGCAGAATC CAATGACAGA CCTGTTCAGC CCGCGCTGA
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Protein sequence | MTSLTQEDVM SPPPSQASKT DQQLLRERAQ QFVLDYPDLH DLAYIAASKI ILQHTHRMFN PEKVYWHRFG SASSSPRTFT GWQHSGKPVQ SMTLIELLIK HFSAHDQEAS DELSLYGGFY TDGPDHGFFD ERNEVPMLPQ DVLNDMWTLD FSSLYSRRME RFWNTHSDNF CILAKAQYLV AAGHCLRKGQ LSPDDFKQVT RVVIADPLQT PTLKALQEPL PLPPGVSVHT LDIDGIKAHD LLRIVIAGGR EVIYWPDAEQ PFMAFDSERA LYHWLKEQFM GEQAAKAMTG HFLRGEASRT QDGARFARAV SDLLAHDWRA DVRLINQSQA PIAGDPFVYL RDVARQAMSA DAREILTSNT DLLKQIWIGY LSAFLRAFGG LAPLSWPVAL TLVGASLANT GLNIDQAVNG KTPAQRKAGV LGAILNTLYL LFNLPLLMSI RVAPQPLQVT TTDVASISSE ALEGGSVLAD PLDNMEGNLL LDTLTPSAEE GRLRGVYTLG NGETWIKLAH LPYRVMFNEQ QQCWMVVNPD NPFAFIGSKP VRLNAEGKWT LMASPGLQGG SPMDVQIPSG SASAPVGKPY ATVGSSFWDR YLQTDIFNEQ HFAETALARQ KQVMSIWDAT PEDVLESDSS PDGNEVYRDP WQGKHRVFKL GDDDYYAANI TLYTQDDAQF NRFLRTGESL GRNQVRAIER LADDIHVVGY NNDVELYRGG SGDRGTSGAV FRSGQIKVGD VLVNTDVTSF SENPYVVSAF ASSRAGAPAS AMLGPVTFDD TSVVFVLPKG RYLRATPVAP FSASPDEAES IFLPGCYFQI DSIEEVSGEF YRIMKVQMQE VDRPIQGRAL YDMRTGEPFS REQYALKLGT DAKVLVDRFF PQNPMTDLFS PR
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