Gene Psyr_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0500 
Symbol 
ID3365976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp542495 
End bp544228 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content65% 
IMG OID637650840 
Productcarbamoyl-phosphate synthase subunit L 
Protein accessionYP_233608 
Protein GI66043767 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.193791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTCTGATAGC CAATCGTGGC GAAATTGCCG TTCGTATTGC CCGTGCCTGC 
CGTGACTACG GAGTCGCCTC GGTGGCGGTG TACGCCGATG CCGATATCGA CGCGCTGCAC
GTGCGTCAGG CCGATGAGGC CTACGGACTG CAGGGCGAGC GCCCGACCGA CACCTACCTG
AACATCGAAA AGCTGCTGGC GGTTGCCGCG CGTGCCGGTG CCGACGCGGT TCACCCAGGC
TACGGCTTCC TCTCGGAGCG CGCCGAATTC GCCCGCGCGG TGATCGACGC CGGTCTGATC
TGGATCGGCC CCGATCCTGC GACCATCGAC GCACTGGGCG ACAAGGTCCA GGCCCGACGT
ATCGCCCTGA AAGTCGGCGC ACCCCTGGTG GCCGGTACGG AAGACCCGGT AAACGATGCC
TCTGAGGTGG TCGCATTTGC CGAGCAGCAC GGCCTGCCGA TTGCCATCAA GGCTGCCTTT
GGCGGCGGTG GGCGCGGCCT GAAAGTCGCC TGGAAGCTCG ATGAAGTCAG CGAGCTGTAC
GAATCTGCAG TGCGTGAGGC GTTGACCGCG TTCGGTCGTG GCGAGTGCTT CGTCGAGCGC
TTCCTGGATC GCCCACGGCA CATCGAAGCG CAGATCATCG CCGACCGTCA TGGCCGGGTG
GTTGTGGTCG GCACCCGTGA CTGCTCGTTG CAGCGTCGCA ACCAGAAGCT GATCGAAGAA
GCGCCAGCGC CTTATCTGAA TGACGAACTG CGCCAGCGCA TTCACGAGTC GGCCCGCGCG
GTCTGCGCCG AAGCGGGCTA TGTCGGTGCC GGTACGGTGG AGTTCCTGCT CAGCGGCGAT
GGCACCCTGT CGTTCCTGGA GGTCAACACG CGCTTGCAGG TCGAACACCC GGTGACGGAA
GAAACCAGCG GTGTGGACCT GGTCATCGAA CAACTTCGCG TCGCCGACGG CCTGCCGCTG
TCGTTCGATG GCACGCCTGT GCCGCGCGGT CACAGCTTTG AATTCCGCAT CAATGCCGAA
GACGCGGGCA ACGGCTTTCT GCCGACGCCG GGGTCTATCA CTTTATTTCA GCCGCCGTCC
GGTCCGGGCG TGCGTCTGGA CACCGGCGTG GCAGAAGGCT CACGGGTTTC ACCAAACTTC
GACTCGATGA TCGCCAAGCT GATCGTCACC GGCGCCACCC GCGAACAGGC CATCAGCCGC
GCCCGCCGTG CGCTGGCCGA GTTCAAGGTG GAAGGCGTGG CCACCGTGCT GCCGTTCCAC
CGGGCGGTCA TGGACCATGC CGACTTCACC GCGGCCAATA CCTTCGCCGT CCACACCCGC
TGGATCGAAA CCGACTTCGC CGAGCACGTC ACCATCGCCC CACGCAACGC AGAGCCGGTC
GATCCCGGCG TGTTGCGCAC CTTCGTTGAA ATCGACGGCA AACGCCACGA ACTGGGCCTG
CCTGCTGAGC TGCTGGCCGG CATGAGCCTG AACGCTGCCG CCCCGGCTGA CGCCAGCCAG
CCAGTCGCCG ATGCCCCGGA CCCGCACGCC GTGCTGACGC CGGTAGCGGG CAACCTGCAT
GCCTGGGCGG TTGAAGACGG TGCGACGGTA GAAAAGGGAC AGGTGATCGC CATCATGGAG
GCGATGAAGA TGGAAACATC GATACTGGCA CCGTGTGCCG GAACCGTGCA GATCGGCAAG
GAGCCTGGGG GGTATCTGGA GGCGAAGGTG GTGATTGGGC GGGTTGAGGC CTGA
 
Protein sequence
MKKVLIANRG EIAVRIARAC RDYGVASVAV YADADIDALH VRQADEAYGL QGERPTDTYL 
NIEKLLAVAA RAGADAVHPG YGFLSERAEF ARAVIDAGLI WIGPDPATID ALGDKVQARR
IALKVGAPLV AGTEDPVNDA SEVVAFAEQH GLPIAIKAAF GGGGRGLKVA WKLDEVSELY
ESAVREALTA FGRGECFVER FLDRPRHIEA QIIADRHGRV VVVGTRDCSL QRRNQKLIEE
APAPYLNDEL RQRIHESARA VCAEAGYVGA GTVEFLLSGD GTLSFLEVNT RLQVEHPVTE
ETSGVDLVIE QLRVADGLPL SFDGTPVPRG HSFEFRINAE DAGNGFLPTP GSITLFQPPS
GPGVRLDTGV AEGSRVSPNF DSMIAKLIVT GATREQAISR ARRALAEFKV EGVATVLPFH
RAVMDHADFT AANTFAVHTR WIETDFAEHV TIAPRNAEPV DPGVLRTFVE IDGKRHELGL
PAELLAGMSL NAAAPADASQ PVADAPDPHA VLTPVAGNLH AWAVEDGATV EKGQVIAIME
AMKMETSILA PCAGTVQIGK EPGGYLEAKV VIGRVEA