Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0500 |
Symbol | |
ID | 3365976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 542495 |
End bp | 544228 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650840 |
Product | carbamoyl-phosphate synthase subunit L |
Protein accession | YP_233608 |
Protein GI | 66043767 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.193791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGG TTCTGATAGC CAATCGTGGC GAAATTGCCG TTCGTATTGC CCGTGCCTGC CGTGACTACG GAGTCGCCTC GGTGGCGGTG TACGCCGATG CCGATATCGA CGCGCTGCAC GTGCGTCAGG CCGATGAGGC CTACGGACTG CAGGGCGAGC GCCCGACCGA CACCTACCTG AACATCGAAA AGCTGCTGGC GGTTGCCGCG CGTGCCGGTG CCGACGCGGT TCACCCAGGC TACGGCTTCC TCTCGGAGCG CGCCGAATTC GCCCGCGCGG TGATCGACGC CGGTCTGATC TGGATCGGCC CCGATCCTGC GACCATCGAC GCACTGGGCG ACAAGGTCCA GGCCCGACGT ATCGCCCTGA AAGTCGGCGC ACCCCTGGTG GCCGGTACGG AAGACCCGGT AAACGATGCC TCTGAGGTGG TCGCATTTGC CGAGCAGCAC GGCCTGCCGA TTGCCATCAA GGCTGCCTTT GGCGGCGGTG GGCGCGGCCT GAAAGTCGCC TGGAAGCTCG ATGAAGTCAG CGAGCTGTAC GAATCTGCAG TGCGTGAGGC GTTGACCGCG TTCGGTCGTG GCGAGTGCTT CGTCGAGCGC TTCCTGGATC GCCCACGGCA CATCGAAGCG CAGATCATCG CCGACCGTCA TGGCCGGGTG GTTGTGGTCG GCACCCGTGA CTGCTCGTTG CAGCGTCGCA ACCAGAAGCT GATCGAAGAA GCGCCAGCGC CTTATCTGAA TGACGAACTG CGCCAGCGCA TTCACGAGTC GGCCCGCGCG GTCTGCGCCG AAGCGGGCTA TGTCGGTGCC GGTACGGTGG AGTTCCTGCT CAGCGGCGAT GGCACCCTGT CGTTCCTGGA GGTCAACACG CGCTTGCAGG TCGAACACCC GGTGACGGAA GAAACCAGCG GTGTGGACCT GGTCATCGAA CAACTTCGCG TCGCCGACGG CCTGCCGCTG TCGTTCGATG GCACGCCTGT GCCGCGCGGT CACAGCTTTG AATTCCGCAT CAATGCCGAA GACGCGGGCA ACGGCTTTCT GCCGACGCCG GGGTCTATCA CTTTATTTCA GCCGCCGTCC GGTCCGGGCG TGCGTCTGGA CACCGGCGTG GCAGAAGGCT CACGGGTTTC ACCAAACTTC GACTCGATGA TCGCCAAGCT GATCGTCACC GGCGCCACCC GCGAACAGGC CATCAGCCGC GCCCGCCGTG CGCTGGCCGA GTTCAAGGTG GAAGGCGTGG CCACCGTGCT GCCGTTCCAC CGGGCGGTCA TGGACCATGC CGACTTCACC GCGGCCAATA CCTTCGCCGT CCACACCCGC TGGATCGAAA CCGACTTCGC CGAGCACGTC ACCATCGCCC CACGCAACGC AGAGCCGGTC GATCCCGGCG TGTTGCGCAC CTTCGTTGAA ATCGACGGCA AACGCCACGA ACTGGGCCTG CCTGCTGAGC TGCTGGCCGG CATGAGCCTG AACGCTGCCG CCCCGGCTGA CGCCAGCCAG CCAGTCGCCG ATGCCCCGGA CCCGCACGCC GTGCTGACGC CGGTAGCGGG CAACCTGCAT GCCTGGGCGG TTGAAGACGG TGCGACGGTA GAAAAGGGAC AGGTGATCGC CATCATGGAG GCGATGAAGA TGGAAACATC GATACTGGCA CCGTGTGCCG GAACCGTGCA GATCGGCAAG GAGCCTGGGG GGTATCTGGA GGCGAAGGTG GTGATTGGGC GGGTTGAGGC CTGA
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Protein sequence | MKKVLIANRG EIAVRIARAC RDYGVASVAV YADADIDALH VRQADEAYGL QGERPTDTYL NIEKLLAVAA RAGADAVHPG YGFLSERAEF ARAVIDAGLI WIGPDPATID ALGDKVQARR IALKVGAPLV AGTEDPVNDA SEVVAFAEQH GLPIAIKAAF GGGGRGLKVA WKLDEVSELY ESAVREALTA FGRGECFVER FLDRPRHIEA QIIADRHGRV VVVGTRDCSL QRRNQKLIEE APAPYLNDEL RQRIHESARA VCAEAGYVGA GTVEFLLSGD GTLSFLEVNT RLQVEHPVTE ETSGVDLVIE QLRVADGLPL SFDGTPVPRG HSFEFRINAE DAGNGFLPTP GSITLFQPPS GPGVRLDTGV AEGSRVSPNF DSMIAKLIVT GATREQAISR ARRALAEFKV EGVATVLPFH RAVMDHADFT AANTFAVHTR WIETDFAEHV TIAPRNAEPV DPGVLRTFVE IDGKRHELGL PAELLAGMSL NAAAPADASQ PVADAPDPHA VLTPVAGNLH AWAVEDGATV EKGQVIAIME AMKMETSILA PCAGTVQIGK EPGGYLEAKV VIGRVEA
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