Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0499 |
Symbol | |
ID | 3365975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 540894 |
End bp | 542498 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637650839 |
Product | Urea amidolyase-related protein |
Protein accession | YP_233607 |
Protein GI | 66043766 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCT ACCCGGCCAA CCTGGATGCA CTCCTGGTTG AACTGTCGAA TCTGGACGAG ACCCTGGCCC TGTTCGAATC GTTACAGCAG ATGCCCATCG CTGGCGTGGA GGAAATCGTC CCGGCCGCCC GAACGTTGCT GGTGCATTTT CGTCCGTCAG CCATCGGTTT CGAAGCACTG GCCACACAGA TCGCCTCGCG CGACATTCGT GGCAAGGCGC GCGAGGCGGG CAAGCTGATC GAAATACCGG TGCATTACAA CGGTGAAGAC CTGGCCGATG TCGCCCGCGA GCTGGACATC AGCGTCGAGG AAGTCATCAA GCGCCACACC AGCAGCGACT ACAACGTTGC GTTCTGCGGC TTTGCGCCCG GTTTTGCCTA CCTCAGCGGC GGCGCCGGGT TCGTGGTGCC ACGGCGCAGC ACGCCGCGCA CGCGTATTCC GGCTGGCGCA GTGGCACTGG CCGGTGGTTT CAGTGGTATT TACCCACAGG CCAGCCCCGG CGGCTGGCAG ATCATCGGGG TGACCACCTC AACCATGTGG GACCTGGGCC GCGACGAGCC CGCCTTGCTC CAGCCCGGCT ACCGCGTGCG TTTCCAGGAT GCCGGTCCGC TCCCGGAGAC TCGTGTGCAG GTTGCCGCAC CTGTCCGGCC GCAGGCGACG ACGGTCAGCG AAGACTATCT GCAGATCGAG ACGCCAGGTC TGCAGACCCT GTTTCAGGAC CTGGGGCGTC CCGGTCGCGC GGGGCAGGGT GTTTCCGCAT CGGGCGCGCT GGATCGCGGC GCCTTGCGCG CTGCCAACCG CGCGGTGGGT AACGATCCGG CGACGGCGTG CCTGGAAATT CTCATGGGCG GCCTGACCTT CACCTGTCAG GGGCAGACCG TTGTGGCGAT TACCGGGGCT CAGGTCAGCG TCGAGGTGCT GACCGCCGAA GGGCAAAAAT TGCGGCCGCT GCTTTATGCG CCTTTTTCTC TACAGAACGG CGATCAGGTC AGCATCGGTT CCCCGACTGC CGGCCTGCGC AATTATCTGG CGGTTCGTGG CGGTTTCATT CATGAGCCGG TGCTCGGCAG CCTGTCCACC GACACGCTGG CCCAGGTCGG GCCCGCCGCG TTGGCAGCGG GTGACCGGCT GGGCTTCACG CGCAGAACCG GCGGCCTTTC AGTATCGACT GCCGAACAAC CGGCCTTCGA GATGCCGCGT AGCGATGAGG TCATCACCCT GGATGTGGTC ATGGGGCCGC GCAGTGACTG GTTCAGCGCC GAAGCACAGC AACTGCTGGC GCAACAGACC TGGCTGGTCA CGCCGCAATC CAACCGTATC GGCATTCGCC TGGCGGGCGA GCAATCGCTG CAACGTGCCG TCGATGGCGA GTTGCCCAGC GAGGGCACCA CAGTCGGCGC CATTCAAGTG CCGCCCAGTG GCCAGCCGGT GCTGTTTCTG GCCGATCACC CGTTGACCGG TGGTTATCCG GTCATCGGCG CAGTCGCCAC CTACCACCTG GACAAGGCCG GGCAGATTCC GGTCAATGCC CGCATTCGCT TCAACCCGCT GAGCGCCTTC GAGCCAGTGC GCCCCGCCAC TTCAGACGAG ACCAAGAACA GATGA
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Protein sequence | MRFYPANLDA LLVELSNLDE TLALFESLQQ MPIAGVEEIV PAARTLLVHF RPSAIGFEAL ATQIASRDIR GKAREAGKLI EIPVHYNGED LADVARELDI SVEEVIKRHT SSDYNVAFCG FAPGFAYLSG GAGFVVPRRS TPRTRIPAGA VALAGGFSGI YPQASPGGWQ IIGVTTSTMW DLGRDEPALL QPGYRVRFQD AGPLPETRVQ VAAPVRPQAT TVSEDYLQIE TPGLQTLFQD LGRPGRAGQG VSASGALDRG ALRAANRAVG NDPATACLEI LMGGLTFTCQ GQTVVAITGA QVSVEVLTAE GQKLRPLLYA PFSLQNGDQV SIGSPTAGLR NYLAVRGGFI HEPVLGSLST DTLAQVGPAA LAAGDRLGFT RRTGGLSVST AEQPAFEMPR SDEVITLDVV MGPRSDWFSA EAQQLLAQQT WLVTPQSNRI GIRLAGEQSL QRAVDGELPS EGTTVGAIQV PPSGQPVLFL ADHPLTGGYP VIGAVATYHL DKAGQIPVNA RIRFNPLSAF EPVRPATSDE TKNR
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