Gene Psyr_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0499 
Symbol 
ID3365975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp540894 
End bp542498 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content65% 
IMG OID637650839 
ProductUrea amidolyase-related protein 
Protein accessionYP_233607 
Protein GI66043766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370
[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCT ACCCGGCCAA CCTGGATGCA CTCCTGGTTG AACTGTCGAA TCTGGACGAG 
ACCCTGGCCC TGTTCGAATC GTTACAGCAG ATGCCCATCG CTGGCGTGGA GGAAATCGTC
CCGGCCGCCC GAACGTTGCT GGTGCATTTT CGTCCGTCAG CCATCGGTTT CGAAGCACTG
GCCACACAGA TCGCCTCGCG CGACATTCGT GGCAAGGCGC GCGAGGCGGG CAAGCTGATC
GAAATACCGG TGCATTACAA CGGTGAAGAC CTGGCCGATG TCGCCCGCGA GCTGGACATC
AGCGTCGAGG AAGTCATCAA GCGCCACACC AGCAGCGACT ACAACGTTGC GTTCTGCGGC
TTTGCGCCCG GTTTTGCCTA CCTCAGCGGC GGCGCCGGGT TCGTGGTGCC ACGGCGCAGC
ACGCCGCGCA CGCGTATTCC GGCTGGCGCA GTGGCACTGG CCGGTGGTTT CAGTGGTATT
TACCCACAGG CCAGCCCCGG CGGCTGGCAG ATCATCGGGG TGACCACCTC AACCATGTGG
GACCTGGGCC GCGACGAGCC CGCCTTGCTC CAGCCCGGCT ACCGCGTGCG TTTCCAGGAT
GCCGGTCCGC TCCCGGAGAC TCGTGTGCAG GTTGCCGCAC CTGTCCGGCC GCAGGCGACG
ACGGTCAGCG AAGACTATCT GCAGATCGAG ACGCCAGGTC TGCAGACCCT GTTTCAGGAC
CTGGGGCGTC CCGGTCGCGC GGGGCAGGGT GTTTCCGCAT CGGGCGCGCT GGATCGCGGC
GCCTTGCGCG CTGCCAACCG CGCGGTGGGT AACGATCCGG CGACGGCGTG CCTGGAAATT
CTCATGGGCG GCCTGACCTT CACCTGTCAG GGGCAGACCG TTGTGGCGAT TACCGGGGCT
CAGGTCAGCG TCGAGGTGCT GACCGCCGAA GGGCAAAAAT TGCGGCCGCT GCTTTATGCG
CCTTTTTCTC TACAGAACGG CGATCAGGTC AGCATCGGTT CCCCGACTGC CGGCCTGCGC
AATTATCTGG CGGTTCGTGG CGGTTTCATT CATGAGCCGG TGCTCGGCAG CCTGTCCACC
GACACGCTGG CCCAGGTCGG GCCCGCCGCG TTGGCAGCGG GTGACCGGCT GGGCTTCACG
CGCAGAACCG GCGGCCTTTC AGTATCGACT GCCGAACAAC CGGCCTTCGA GATGCCGCGT
AGCGATGAGG TCATCACCCT GGATGTGGTC ATGGGGCCGC GCAGTGACTG GTTCAGCGCC
GAAGCACAGC AACTGCTGGC GCAACAGACC TGGCTGGTCA CGCCGCAATC CAACCGTATC
GGCATTCGCC TGGCGGGCGA GCAATCGCTG CAACGTGCCG TCGATGGCGA GTTGCCCAGC
GAGGGCACCA CAGTCGGCGC CATTCAAGTG CCGCCCAGTG GCCAGCCGGT GCTGTTTCTG
GCCGATCACC CGTTGACCGG TGGTTATCCG GTCATCGGCG CAGTCGCCAC CTACCACCTG
GACAAGGCCG GGCAGATTCC GGTCAATGCC CGCATTCGCT TCAACCCGCT GAGCGCCTTC
GAGCCAGTGC GCCCCGCCAC TTCAGACGAG ACCAAGAACA GATGA
 
Protein sequence
MRFYPANLDA LLVELSNLDE TLALFESLQQ MPIAGVEEIV PAARTLLVHF RPSAIGFEAL 
ATQIASRDIR GKAREAGKLI EIPVHYNGED LADVARELDI SVEEVIKRHT SSDYNVAFCG
FAPGFAYLSG GAGFVVPRRS TPRTRIPAGA VALAGGFSGI YPQASPGGWQ IIGVTTSTMW
DLGRDEPALL QPGYRVRFQD AGPLPETRVQ VAAPVRPQAT TVSEDYLQIE TPGLQTLFQD
LGRPGRAGQG VSASGALDRG ALRAANRAVG NDPATACLEI LMGGLTFTCQ GQTVVAITGA
QVSVEVLTAE GQKLRPLLYA PFSLQNGDQV SIGSPTAGLR NYLAVRGGFI HEPVLGSLST
DTLAQVGPAA LAAGDRLGFT RRTGGLSVST AEQPAFEMPR SDEVITLDVV MGPRSDWFSA
EAQQLLAQQT WLVTPQSNRI GIRLAGEQSL QRAVDGELPS EGTTVGAIQV PPSGQPVLFL
ADHPLTGGYP VIGAVATYHL DKAGQIPVNA RIRFNPLSAF EPVRPATSDE TKNR