Gene Psyr_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0496 
Symbol 
ID3365972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp538075 
End bp539307 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content62% 
IMG OID637650836 
Producthypothetical protein 
Protein accessionYP_233604 
Protein GI66043763 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGA CTGCCAATGA GTTCACCAAG GCGCGCCGCG CCTCATTGAT CGCCGCGATC 
TTCATGATGG CGACCTCTGC CATCGGCCCT GGCTTTCTGA CCCAGACAGC CACGTTCACC
GCGACGCTGG GGGCGGCGTT TGCCTTCGGC ATCCTGGCTT CGATCCTGAT CGACTTCGTG
GTACAGCTGA ATGTCTGGCG CATCGTCACG CTGACCCGAA TGCGCGCGGC CGACCTGGCC
AACGCAGCGA TCCCCGGCAG CGGTTATCTG CTCGCGGTAT TGGTCATCTT CGGCGGCCTG
GTATTCAGTC TGGGCAACAT CGCCGGTGCG GGCCTGGGCT TGAACGCGTT GACCGGGCTT
GATCCCAAAT GGGGTGGCGC CTTGAGCGCG TTGATCGCCA TCGCGATCTT TTCGTCGCAC
CGCGCCGGCA TCGCCATGGA CCGCATCATG ATGGTGCTGG GCACCCTGAA GGTCTGCCTG
ATTCTGTTCG CCGCCTTTGC CTCGCATCCG CCGCTGGGTG AAGCGCTGCG CCAGACCGTC
CTGCCGGACA TGGTCGATTT CGCGGCCATC ACCACCATTG TCGGCGGCAC GGTCGGCGGC
TATATCACTT ACGCCGGTGC TCACCGCTTG CTGGATCGCG GCACCGTCGG GGTCGAGAAC
ATCGATGTAG TGTCCAAGGC GGCGCTCACC GGTATTCTGG TCACCGGGGT TGTTCGTTAC
ATACTCTTTC TGGCGATCCT CGGCGTGGTC GCCAGCGGCG TCGTCATCGA CGTGTCCGGT
AAGGGCGCAA ACCCTGCGGC CCAGGCGTTC ACCGCTGCCG CTGGCAACTT CGGCCTGATC
ATGTTCGGCC TGGTGCTCTG GGCGGCCGGC ATCAGCAGCG TGATCGGCGC GTCCTATACT
TCAATGTCGT TCATCACCGT GTTTTCCAAG CGCATCACTG AACGCGCGCG CAACCTCGCG
ACTGTCGGCT TTATCCTGAT CACCGTGGTC GTATACGTCA TGTGGGGCAA ACCACCGGCC
GCGCTGCTGG TCTTTGCCGG GGGCTTCAAC GGTTTGATCC TGCCACTGGG CCTGAGCATT
TTCATGTACG TCGGCTGGCG CCGGTCCGAC ATGATGGACG GCTACCACTA CCCGCGCTGG
CTGCTGGTAC TGGGCGTGCT GACCTGTCTG CTGTCGTGGT ACATGGCGTT CAAATCAGTC
GGTCCTATCT TTGCCTTCAT CAATGCAGCC TGA
 
Protein sequence
MTQTANEFTK ARRASLIAAI FMMATSAIGP GFLTQTATFT ATLGAAFAFG ILASILIDFV 
VQLNVWRIVT LTRMRAADLA NAAIPGSGYL LAVLVIFGGL VFSLGNIAGA GLGLNALTGL
DPKWGGALSA LIAIAIFSSH RAGIAMDRIM MVLGTLKVCL ILFAAFASHP PLGEALRQTV
LPDMVDFAAI TTIVGGTVGG YITYAGAHRL LDRGTVGVEN IDVVSKAALT GILVTGVVRY
ILFLAILGVV ASGVVIDVSG KGANPAAQAF TAAAGNFGLI MFGLVLWAAG ISSVIGASYT
SMSFITVFSK RITERARNLA TVGFILITVV VYVMWGKPPA ALLVFAGGFN GLILPLGLSI
FMYVGWRRSD MMDGYHYPRW LLVLGVLTCL LSWYMAFKSV GPIFAFINAA