Gene Psyr_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0495 
Symbol 
ID3365971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp537156 
End bp537905 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content59% 
IMG OID637650835 
Producttranscriptional regulator GntR 
Protein accessionYP_233603 
Protein GI66043762 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC TGTTGACCTT CGTCCTTGCC AGCCAATCAG CTGTCGTGGA ATATCGACCT 
GGCTTTTCTT TCTCTGGACC CTTTATGAAC GACGCTGCTT CTACGCTCCC TCGCACCCTC
GGAGAATCAA TCACCACTGA GCTTCGCAGA ATGCTGGTCG AGGGCGAGCT GGTGCCTGGT
CAGCGCCTCT CGGAAGCCGC TCTGGCCGAG AGTCTGGATA TTTCCCGTAA TACCCTGAGA
GAAGCCTTCA GAGTACTGAC CCGCGAAGGA CTGCTGACCC ACGAGCCCAA TCGCGGGGTC
ACCGTGGCCA AGCCTGATAT GGCGTCGATC ATCGATATCT ACCGAATTCG GCGCTTCATC
GAGTGCGGGG CGATTGCCCA GGCTTATCCA CAGCATCCCG GTGTGCTGCA CATGCGCAAT
GCGGTCGAGG CAGGCGTGCA GGCGCGTGAA GCGAAGGACT GGATCGCCGT GGGCACCGCC
AACATGATGT TCCACAAGGC CATCGTCGAG CTGTCCGACA GCCCGCGACT GGTGACGTTT
TATGCGCAGA TATCGGCAGA GTTGCGACTG GCCTTCGGCT TGCTCAACAA TCCGGAACTG
CTGCATTCGC CTTATCTGGA CATGAATGCT GCGGTACTCG GGCGCCTGGA CGCGGGCAAG
ACCGATGAGG CAACGCGCAT GCTCGAGGAT TATCTGGTGC AATCGGAACG AACGATTCTG
GCCGCCTTCG AGCGAAGCCG GAACCGATAG
 
Protein sequence
MKHLLTFVLA SQSAVVEYRP GFSFSGPFMN DAASTLPRTL GESITTELRR MLVEGELVPG 
QRLSEAALAE SLDISRNTLR EAFRVLTREG LLTHEPNRGV TVAKPDMASI IDIYRIRRFI
ECGAIAQAYP QHPGVLHMRN AVEAGVQARE AKDWIAVGTA NMMFHKAIVE LSDSPRLVTF
YAQISAELRL AFGLLNNPEL LHSPYLDMNA AVLGRLDAGK TDEATRMLED YLVQSERTIL
AAFERSRNR