Gene Psyr_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0494 
Symbol 
ID3365970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp535554 
End bp537017 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content61% 
IMG OID637650834 
Producthypothetical protein 
Protein accessionYP_233602 
Protein GI66043761 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAGCAC TCGACGAACT CATTTTCGAT AACCGCTTTG CCCGTCTGGG CGATGCGTTC 
TCCACTTCCG TGCTGCCTGA GCCCATCGAT GCGCCGCAGC TGGTAGTAGC CAGCCAGTCA
GCGCTGGCGC TGCTGGACCT GGCGCCTGAG CAGGCCGATC TGCCGCTGTT CGCGGAAATC
TTCAGTGGCC ACAAACTGTG GTCGGAGGCA GAACCTCGGG CGATGGTGTA TTCCGGGCAT
CAGTTTGGCT CCTACAACCC GCGCCTGGGC GACGGTCGCG GGCTGCTGCT CGGCGAGGTC
TACAACGATG CAGGTGAGCA CTGGGACCTG CACCTCAAGG GCGCAGGCCG CACGCCGTAT
TCACGCATGG GTGACGGGCG CGCCGTACTG CGCTCGTCGA TCCGCGAGTT TCTGGCCTCC
GAAGTCCTGC ACGCACTGGG CATCCCCAGC AGCCGCGCGG GGTGTGTGGT CAGCTCCAGC
ACGCCGGTAT GGCGCGAAAC CCAGGAGCAT GCAGCCATGG TGCTGCGCTT GGCGCAGAGC
CATGTGCGCT TCGGCAGTCT GGAATACTTC TTCTACACCA AGCAGCCAGA GCAGTTGAAG
ACCCTCGCCG AACATGTGCT GACGATGCAT TACCCGCACT GCCAGGAGCA GCCGGAGCCG
TATCTGGCGA TGTTCCGGGA AATCGTCGAG CGCAACGCAG AGCTGATTGC CAAGTGGCAG
GCCTACGGCT TCTGCCATGG TGTGATGAAC ACCGACAACA TGTCGATTCT GGGCATTACC
TTCGACTTCG GACCATTCGC GTTTCTGGAT GATTTCGATG AGCACTTCAT CTGCAACCAC
TCCGACCATG AAGGCCGTTA TTCCTTCAGC AATCAGGTGC CTATCGCGCA ATGGAACCTC
AGCGCACTGG CACAGGCGCT GACCCCTTTC ATCAGCGTGG ACGCGTTGCG CGAGGCGATC
GGTTTGTTCC TGCCGCTGTA TCAGGCGCAC TACCTGGACC TGATGCGCCG TCGACTGGGC
CTGACCGTCG CCCATGAGCA GGACGAACAA CTGGTCAGCC AGTTGCTGAA GCTGATGCAG
AACAGTGGCG TGGATTACAC CCTGTTCTTC CGCCGCCTGG GTGACCAGCC AGCCGCCGAG
GCGCTGCGCA CGTTGCGCGA CGACTTTGTC GATATCAAGG GCTTCGATGG CTGGGCGCAA
GCGTATCAGG CGCGTATTGC CCTTGAGAAC AACGGCACCG AGCAGGAGCG TCAGACCCGC
ATGCATGCGG TCAATCCGCT GTACATCCTG CGCAACTACC TGGCACAGAA CGCCATCGCT
GCGGCGGAAA AAGGCGACTA CGCAGAAGTC CGCCGCCTGC ATCAGGTGCT CTGCACCCCC
TTCACCGAAC AACCCGGCAT GCAAGGCTAC GCCCAACGGC CGCCGGACTG GGGCAAGCAC
CTGGAAATCA GCTGTTCGTC GTGA
 
Protein sequence
MKALDELIFD NRFARLGDAF STSVLPEPID APQLVVASQS ALALLDLAPE QADLPLFAEI 
FSGHKLWSEA EPRAMVYSGH QFGSYNPRLG DGRGLLLGEV YNDAGEHWDL HLKGAGRTPY
SRMGDGRAVL RSSIREFLAS EVLHALGIPS SRAGCVVSSS TPVWRETQEH AAMVLRLAQS
HVRFGSLEYF FYTKQPEQLK TLAEHVLTMH YPHCQEQPEP YLAMFREIVE RNAELIAKWQ
AYGFCHGVMN TDNMSILGIT FDFGPFAFLD DFDEHFICNH SDHEGRYSFS NQVPIAQWNL
SALAQALTPF ISVDALREAI GLFLPLYQAH YLDLMRRRLG LTVAHEQDEQ LVSQLLKLMQ
NSGVDYTLFF RRLGDQPAAE ALRTLRDDFV DIKGFDGWAQ AYQARIALEN NGTEQERQTR
MHAVNPLYIL RNYLAQNAIA AAEKGDYAEV RRLHQVLCTP FTEQPGMQGY AQRPPDWGKH
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