Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0485 |
Symbol | |
ID | 3365961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 522543 |
End bp | 523115 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637650825 |
Product | hypothetical protein |
Protein accession | YP_233593 |
Protein GI | 66043752 |
COG category | [K] Transcription |
COG ID | [COG1678] Putative transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.127846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TCTCTCCGAG TTATCTCAAG CATCATTTCC TCATCGCCAT GCCTCACATG CACGATGAGA ACTTTGCTCA GACCTTGACC TACATTGTCG AGCACAACGC CAATGGCGCC ATGGGGCTGG TGATCAACCG CCCGCAAAGC CTGACCCTGG CCGATGTGCT CGAACAACTG CGACCGGAAC TGCCGGCGCC GAGACACTGC CAGGACATCG TCATTCATAC CGGCGGGCCG GTGCAGACCG ATCGGGGCTT TGTCCTGCAT CCCAGCGGCC AGACCTTTCA GGCAACGGTC AATCTTCCGG GCGGGATTTC CTTGTCGACC TCGCAGGATG TGCTGTTCTC CATCGCCGAT GGCTACGGGC CTGATCAAAA TGTGATCACT CTGGGCTACG CGGGCTGGGA TGCCGGTCAA CTGGATGCTG AAATGGCCGA CAACGCCTGG CTGACCTGCT CGTTCGACCC GGCCATCCTG TTCGATGTCG ACAGCGACCA GCGTCTGGAG GCTGCCGCCA GACGCCTGGG TATCAATCTC AACCTGATCT CGACCCAGGC AGGGCACGCT TGA
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Protein sequence | MKKVSPSYLK HHFLIAMPHM HDENFAQTLT YIVEHNANGA MGLVINRPQS LTLADVLEQL RPELPAPRHC QDIVIHTGGP VQTDRGFVLH PSGQTFQATV NLPGGISLST SQDVLFSIAD GYGPDQNVIT LGYAGWDAGQ LDAEMADNAW LTCSFDPAIL FDVDSDQRLE AAARRLGINL NLISTQAGHA
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