Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0477 |
Symbol | |
ID | 3365953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 515721 |
End bp | 516407 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637650817 |
Product | hypothetical protein |
Protein accession | YP_233585 |
Protein GI | 66043744 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGA TAGCAGCGAA CATTTCAACG CTCGAACAGC GAATTCGCGA CGCAGCGCTT GCCGCCGAGC GCGATCCGGC GTCCGTCGGC CTACTGGCGG TGAGTAAAAC CAAGCCTGCC AGTGACCTGC GTGAAGCTTA CAACGCAGGC TTGCGCGATT TTGGCGAAAA TTATTTACAG GAAGCGCTGG GCAAACAGCT CGAACTGAGC GACCTGCCCT TGTGCTGGCA CTTCATTGGC CCCATTCAAT CGAACAAGAC GCGAGCTATC GCCGAGAACT TCGACTGGGT ACATTCCGTG GACCGCCTGA AAATCGCGCA ACGCCTGTCC GAGCAACGCC CCGAAGCGCT TGAACCGCTG AACATCTGCA TTCAGGTGAA CGTCAGTGGC GAGGCCAGCA AGTCGGGCTG TACGCCTCAG GACCTGCCTG CGCTGGCCGC TACCATCATC GCCCTGCCGC GACTCAGGTT GCGCGGCCTG ATGGCCATCC CCGAGCCCAC AGACGATCCT GCGGCGCAGG ACGCATCCTT CGCCGCCGTA CGCGCGCTGC AGGAGCAGTT GAACCTGGCG CTCGACACAC TTTCCATGGG CATGAGCCAC GACCTGGAAG CCGCCATTGC ACAAGGCGCA ACCTGGGTGC GCATCGGCAC CGCTCTTTTT GGCGCCCGCG ACTATGGCCA GCCATAA
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Protein sequence | MSTIAANIST LEQRIRDAAL AAERDPASVG LLAVSKTKPA SDLREAYNAG LRDFGENYLQ EALGKQLELS DLPLCWHFIG PIQSNKTRAI AENFDWVHSV DRLKIAQRLS EQRPEALEPL NICIQVNVSG EASKSGCTPQ DLPALAATII ALPRLRLRGL MAIPEPTDDP AAQDASFAAV RALQEQLNLA LDTLSMGMSH DLEAAIAQGA TWVRIGTALF GARDYGQP
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