Gene Psyr_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0474 
SymbolmetX 
ID3365950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp512859 
End bp513998 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content61% 
IMG OID637650814 
Producthomoserine O-acetyltransferase 
Protein accessionYP_233582 
Protein GI66043741 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2021] Homoserine acetyltransferase 
TIGRFAM ID[TIGR01392] homoserine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.540112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGG TATTCCCTCA CGATTCTGTC GGACTGGTCA CGCCGCAAAC GGCGCATTTC 
AGCGAGCCTC TGGCGCTGGC CTGCGGGCGT TCGTTGCCAG CCTATGACCT GATTTACGAA
ACCTACGGTC AACTCAACGC CGCACGCAGC AATGCCGTGC TGATCTGTCA TGCGCTGTCC
GGGCATCACC ATGCCGCAGG CTTCCACAGC GCTGACGACC GCAAACCCGG TTGGTGGGAC
AGCTGTATCG GTCCCGGCAA GCCGATCGAC ACCACTAAGT TTTTCGTCGT CAGCCTCAAC
AATCTGGGCG GTTGCAACGG CTCGACCGGG CCGAGCAGCA TTGACCCGGA CACCGGCAAG
CCGTTCGGCG CCAATTTCCC GGTGGTGACC GTGGAAGACT GGGTCAACAG CCAGGCCCGG
CTGGCCGATC TGCTCGGCAT CGACACCTGG GCTGCGGTGA TTGGCGGCAG CCTGGGCGGC
ATGCAGGCGC TGCAATGGAC CATCAGTTAT CCGAACCGCG TGCGCCATTG CCTGGCAATT
GCCTCGGCGC CCAAGCTGTC GGCACAGAAC ATCGCGTTCA ACGAGGTGGC CCGCCAGGCC
ATTCTCACCG ACCCGGAATT TCACGGTGGC TCGTTCCAGG AACGCGGCGT GATTCCCAAG
CGCGGCCTGA TGCTGGCGCG AATGGTCGGG CACATCACCT ACCTGTCGGA TGACTCGATG
GGCGAGAAAT TCGGCCGTGG CCTGAAGAGC GAAAAACTCA ACTACGACTT TCACAGCGTC
GAGTTCCAGG TCGAAAGCTA CCTGCGCTAT CAGGGCGAAG AGTTTTCCGG GCGTTTCGAC
GCCAATACCT ACCTGTTGAT GACCAAGGCA CTGGATTACT TCGACCCTGC GGCGAACTTC
AACGACGACC TGGCCAAAAC CTTCGCCAAC GCCACCGCCA GGTTCTGCGT GATGTCGTTC
ACCACCGACT GGCGCTTCTC GCCGGCCCGC TCGCGGGAAC TGGTGGACGC GCTGATGGCC
GCGCGCAAGG ACGTCTGCTA CCTGGAAATC GATGCACCGC AGGGCCACGA CGCCTTTCTG
ATCCCGATTC CGCGCTACTT GCAGGCTTTC GGTAATTACA TGAACCGAAT TTCGTTGTGA
 
Protein sequence
MPTVFPHDSV GLVTPQTAHF SEPLALACGR SLPAYDLIYE TYGQLNAARS NAVLICHALS 
GHHHAAGFHS ADDRKPGWWD SCIGPGKPID TTKFFVVSLN NLGGCNGSTG PSSIDPDTGK
PFGANFPVVT VEDWVNSQAR LADLLGIDTW AAVIGGSLGG MQALQWTISY PNRVRHCLAI
ASAPKLSAQN IAFNEVARQA ILTDPEFHGG SFQERGVIPK RGLMLARMVG HITYLSDDSM
GEKFGRGLKS EKLNYDFHSV EFQVESYLRY QGEEFSGRFD ANTYLLMTKA LDYFDPAANF
NDDLAKTFAN ATARFCVMSF TTDWRFSPAR SRELVDALMA ARKDVCYLEI DAPQGHDAFL
IPIPRYLQAF GNYMNRISL