Gene Psyr_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0466 
Symbol 
ID3365942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp504830 
End bp505735 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID637650806 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_233574 
Protein GI66043733 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGCA AAAACGTTGG CGTTATCGGC CTGGGTGCGA TGGGTCTGGG CATTGCCCGC 
TCGTTGCTGC GTAGCGGCTT CACTGTGCAT GCCTGTGATG TGCGCACCAG CGTGACCGAA
GCATTCGCCC AGGAAGGCGG GGTGGCCTGT GATTCCCCGG CCAGCATGGC CGCTGCCTGC
GATGTGATCA TCACAGTCGT AGTCAATGCC GAGCAGACCG AAACCGTGCT GTTTGGCGAA
AACGGCGCCA TTGCCGCGCT GCGTCCGGGC TGCCTGGTCA TCGGTTGCGC CACCGTCGCG
CCCACCTTCG CCGTCGAACT GGGCGAGCGT CTGGCTGCAC AGAACCTGCT GTACCTCGAT
GCGCCGATCT CCGGCGGTGC CGCCAAGGCG GCCGCTGGCC AGATGACCAT GATGACCTCC
GGCCCGGCCG AGTCCTACGC CAAGGCAGAA GCCATCCTCA ACGGCATGGC CGGTAAGGTC
TATCGCCTGG GCGACGTCCA CGGTCTGGGC TCGAAAGTCA AAATCATCAA TCAACTGCTC
GCGGGCGTAC ACATCGCCGC CAGCGCCGAA GCCATGGCTC TGGGCCTGCG CGAAGGTGTC
GATGCTGACG CGCTGTATGA AGTGATCACC AACAGTGCCG GTAACTCGTG GATGTTCGAG
AACCGCGTGC CGCACATCCT CAATGCCGAT TACACGCCGC TGTCGGCCGT GGACATTTTC
GTCAAGGACC TCGGCCTGGT GCTGGATACC GCACGCAGCA GCAAATTCCC GCTGCCACTC
TCGGCCACCG CGCACCAGAT GTTCATGCAG GCATCCAGCG CCGGCTTCGG TCGCGAGGAT
GACTCGGCCG TGATCAAGAT TTTCCCGGGC ATCGAGTTGC CGAAAGCCAA GCCAGAAAAA
GCCTGA
 
Protein sequence
MTGKNVGVIG LGAMGLGIAR SLLRSGFTVH ACDVRTSVTE AFAQEGGVAC DSPASMAAAC 
DVIITVVVNA EQTETVLFGE NGAIAALRPG CLVIGCATVA PTFAVELGER LAAQNLLYLD
APISGGAAKA AAGQMTMMTS GPAESYAKAE AILNGMAGKV YRLGDVHGLG SKVKIINQLL
AGVHIAASAE AMALGLREGV DADALYEVIT NSAGNSWMFE NRVPHILNAD YTPLSAVDIF
VKDLGLVLDT ARSSKFPLPL SATAHQMFMQ ASSAGFGRED DSAVIKIFPG IELPKAKPEK
A