Gene Psyr_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0465 
Symbol 
ID3365941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp503530 
End bp504819 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content65% 
IMG OID637650805 
ProductHopAN1 protein 
Protein accessionYP_233573 
Protein GI66043732 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA ATAACGCTCG CCCGCTGCTG GGCTGCATTG CCGATGACTT CACCGGCGCC 
ACCGACCTGG CCAACATGCT GGTGCGGGGC GGCATGCGCA CCGTGCAGAG CATTGGCATC
CCCAGCGCCG AGATGGCGGC CGGTCTGGAC GCCGACGCGA TTGTCATCGC CCTGAAATCG
CGTACCACGC CCAGCGCCGA GGCGGTGGCT GAATCCCTGG CTGCTCTGGA ATGGCTGCGC
GAGCGCGGCT GCGAGCAGAT ATTCTTCAAG TACTGCTCGA CCTTCGATTC CACTGCTGCA
GGTAACATCG GTCAGGTCAG CGAAGCACTG CTGGAGCAAC TGGGCAGCGA TTTCACCCTC
GCCTGCCCGG CCTTCCCGGA AAACGGCCGC ACGATTTTCC GTGGTCACCT GTTCGTGCAG
GACCAGTTGC TCAGCGAATC GGGCATGCAG AACCACCCGC TGACGCCCAT GACCGACGCC
AATCTGGTGC GTGTGCTGCA AGCGCAGACT AGCCACAAGG TCGGCCTGTT GCGCTATGAC
AGCATTGCCC AGGGCGTCGA AGGCGTGCGC AACAGAATTG CCGAGCTGCG CGCCGAAGGT
GTGAGCATGG CGATTGCCGA TGCCCTGTCG GATGCGGATC TGTACACCCT CGGCGAAGCC
TGCGCCGACT TGCCGCTGCT GACCGGTGGC TCGGGGCTGG CGCTGGGCCT GCCGGGCAAC
TTCCGCAAGG CGGGCAAGCT GCGCGATATC GATGCGGCCA AACAGGTCGC CATCAGTGGC
GGCGAAGTGG TACTGGCGGG TAGCGCATCG GTCGCCACCA ATGGTCAGGT CGCGGCGTGG
CTGGAAGCCG ATCGCCCTGC GCTGCGCATC AATCCGCTGG AGCTGGCCGC TGGCAAGCCA
GTGGTCGAGC AGGCGCTGGC CTTTGCCAGA GACGCCGGGC AGACCGTATT GATCTACGCC
ACCAGCACTC CGGACGAAGT CAAAGCCGTG CAGCAAGAAC TGGGCGTCGA ACGCTCCGGC
GCTATGGTCG AAGCTGCACT TGGTGAAATC GCCAAAGGGC TGCTGGACGC AGGCGTGCGC
CGTTTCGTGG TTGCCGGTGG CGAAACCTCC GGTGCCGTGG TTCAGGCACT GGGCGTGCAG
TTGCTGCAAA TCGGCGCGCA GATCGACCCG GGCGTTCCCG CCACAGTGAG CAGCGGCGCA
CAACCGCTGG CCCTGGCCCT CAAATCCGGC AACTTCGGTG CGCGCGACTT CTTCGCCAAG
GCGCTCAAGC AACTGGCGGG GGCTGCCTGA
 
Protein sequence
MSLNNARPLL GCIADDFTGA TDLANMLVRG GMRTVQSIGI PSAEMAAGLD ADAIVIALKS 
RTTPSAEAVA ESLAALEWLR ERGCEQIFFK YCSTFDSTAA GNIGQVSEAL LEQLGSDFTL
ACPAFPENGR TIFRGHLFVQ DQLLSESGMQ NHPLTPMTDA NLVRVLQAQT SHKVGLLRYD
SIAQGVEGVR NRIAELRAEG VSMAIADALS DADLYTLGEA CADLPLLTGG SGLALGLPGN
FRKAGKLRDI DAAKQVAISG GEVVLAGSAS VATNGQVAAW LEADRPALRI NPLELAAGKP
VVEQALAFAR DAGQTVLIYA TSTPDEVKAV QQELGVERSG AMVEAALGEI AKGLLDAGVR
RFVVAGGETS GAVVQALGVQ LLQIGAQIDP GVPATVSSGA QPLALALKSG NFGARDFFAK
ALKQLAGAA