Gene Psyr_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0462 
Symbol 
ID3365938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp500492 
End bp501277 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID637650802 
Producthydroxypyruvate isomerase 
Protein accessionYP_233570 
Protein GI66043729 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGTT TTGCCGCCAA CCTCAGCATG CTGTACCCGC AGCATGATTT TCTTGAGCGC 
TTTGCCGCAG CCGCTGCCGA CGGTTTCGGC GCGGTCGAGT ACCTGTTTCC TTATGCTTAC
ACGCCGCAGG AGCTCAAGCA GCGCCTGAGC GACAACGGTC TGGTGCAGGC GCTGTTCAAC
GCTCCACCGG GCGACTGGGA CGCGTGCGAG CGAGGCATTG CCACCCTGCC GGGCCGTGAA
GCGGAATTTC GCAGCGGTAT CGAGCGGGCA CTGGAATATG CGCAGGTGCT GGGCAATGAC
CGTGTGCATG TCATGGCCGG TCTATTGCCT AACGAAGGGT TGCGTGAGCG TCATCAGGCG
GTCTATCTGG AGAACCTGGC GTTCGCGGCT GAGCAAGCCA AGAGCGCAGG CGTCACGATC
CTGATCGAGC CGATCAACAC CCGCGACATG CCGGGCTTCT TCCTCAACCG CCAGGATCAG
GCGCAGGACA TCTGCAAGCT GGTGGGCGCC GACAACCTGA AAGTGCAGTT CGACTGCTAC
CACTGCCAGA TCGTCGAAGG CGACCTGACG ACCAAGCTGC GTCGTGACTT TGCAGGCATC
GGCCACATCC AGATCGCCGG GGTGCCGGAT CGCAACGAAC CGGACCTGGG CGAACTGAAC
TACGAGCACC TGTTCAACGT CATCGACGAA CTGGGCTACA GCGGCTGGAT CGGTTGCGAA
TATCGCCCGA AAGGCGATAC CAGCGAAGGT CTGGCATGGT TGCGCGCGTT GCAGGCCAAG
GGCTGA
 
Protein sequence
MPRFAANLSM LYPQHDFLER FAAAAADGFG AVEYLFPYAY TPQELKQRLS DNGLVQALFN 
APPGDWDACE RGIATLPGRE AEFRSGIERA LEYAQVLGND RVHVMAGLLP NEGLRERHQA
VYLENLAFAA EQAKSAGVTI LIEPINTRDM PGFFLNRQDQ AQDICKLVGA DNLKVQFDCY
HCQIVEGDLT TKLRRDFAGI GHIQIAGVPD RNEPDLGELN YEHLFNVIDE LGYSGWIGCE
YRPKGDTSEG LAWLRALQAK G