Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0462 |
Symbol | |
ID | 3365938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 500492 |
End bp | 501277 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637650802 |
Product | hydroxypyruvate isomerase |
Protein accession | YP_233570 |
Protein GI | 66043729 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGTT TTGCCGCCAA CCTCAGCATG CTGTACCCGC AGCATGATTT TCTTGAGCGC TTTGCCGCAG CCGCTGCCGA CGGTTTCGGC GCGGTCGAGT ACCTGTTTCC TTATGCTTAC ACGCCGCAGG AGCTCAAGCA GCGCCTGAGC GACAACGGTC TGGTGCAGGC GCTGTTCAAC GCTCCACCGG GCGACTGGGA CGCGTGCGAG CGAGGCATTG CCACCCTGCC GGGCCGTGAA GCGGAATTTC GCAGCGGTAT CGAGCGGGCA CTGGAATATG CGCAGGTGCT GGGCAATGAC CGTGTGCATG TCATGGCCGG TCTATTGCCT AACGAAGGGT TGCGTGAGCG TCATCAGGCG GTCTATCTGG AGAACCTGGC GTTCGCGGCT GAGCAAGCCA AGAGCGCAGG CGTCACGATC CTGATCGAGC CGATCAACAC CCGCGACATG CCGGGCTTCT TCCTCAACCG CCAGGATCAG GCGCAGGACA TCTGCAAGCT GGTGGGCGCC GACAACCTGA AAGTGCAGTT CGACTGCTAC CACTGCCAGA TCGTCGAAGG CGACCTGACG ACCAAGCTGC GTCGTGACTT TGCAGGCATC GGCCACATCC AGATCGCCGG GGTGCCGGAT CGCAACGAAC CGGACCTGGG CGAACTGAAC TACGAGCACC TGTTCAACGT CATCGACGAA CTGGGCTACA GCGGCTGGAT CGGTTGCGAA TATCGCCCGA AAGGCGATAC CAGCGAAGGT CTGGCATGGT TGCGCGCGTT GCAGGCCAAG GGCTGA
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Protein sequence | MPRFAANLSM LYPQHDFLER FAAAAADGFG AVEYLFPYAY TPQELKQRLS DNGLVQALFN APPGDWDACE RGIATLPGRE AEFRSGIERA LEYAQVLGND RVHVMAGLLP NEGLRERHQA VYLENLAFAA EQAKSAGVTI LIEPINTRDM PGFFLNRQDQ AQDICKLVGA DNLKVQFDCY HCQIVEGDLT TKLRRDFAGI GHIQIAGVPD RNEPDLGELN YEHLFNVIDE LGYSGWIGCE YRPKGDTSEG LAWLRALQAK G
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