| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0458 |
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| Symbol | |
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| ID | 3365934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 494944 |
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| End bp | 496833 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637650798 |
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| Product | helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal |
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| Protein accession | YP_233566 |
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| Protein GI | 66043725 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG CTTCCCTCGG TCTCTCCGAG GCTTTAGTCC GCGCCATCGA GGCAGCCGGC
TATACCCAGC CTACCCCCGT GCAACAGCGG GCCATTCCCG CCGTGTTGCA AGGTCGCGAC
CTGATGGTTG CGGCACAGAC CGGTACTGGT AAAACCGGCG GTTTCGCCCT CCCTATTCTG
GAGCGGCTGT TTCCCAATGG TGTTCCGGAC AAATCCCAGC GTCACGGCCC GCGTCAACCG
CGCGTTCTGG TCCTGACCCC GACCCGCGAA CTGGCCGCAC AGGTGCACGA GAGCTTCAAG
CTCTATGCCC GCGACCTGAA GTTCGTCAGC GCCTGCATCT TCGGCGGCGT CGGCATGAAC
CCGCAGGTTC AGGCCATGTC CCGTGGTGTG GACGTCCTGG TGGCCTGCCC TGGCCGCCTG
CTCGACCTGG CCGGTCAAGG CAGTGTCGAC CTCTCCCACG TCGAAATCCT GGTGCTCGAT
GAAGCAGACC GGATGCTCGA CATGGGCTTC GTGCATGACG TCAAGAAGGT CCTCGCGCGG
CTGCCGGCCA AGCGCCAGAA CCTGCTGTTC TCGGCTACCT TCTCCAATGA CATCACGTCG
TTGGCCGGCA AGCTGCTGCA CAACCCAGAG CGCATCGAAG TCACGCCGCC GAACACCACG
GTCGAGCGCA TCGAGCAACG GGTTTTCCGC CTGGCAGCCA ACCACAAGCG TTCGCTGCTG
GCGCACCTGA TTACCGTCGG CGCCTGGGAA CAGGTGCTGG TCTTCACCCG CACCAAGCAC
GGTGCCAACC GTCTGGCCGA GTACCTGGAC AAGCACGGCC TTGCGGCTGT CGCGATCCAC
GGCAACAAGA GCCAGAACGC CCGGACCAAG GCCCTGGCCG ACTTCAAGGC AGGCGATGTA
CGCATCATGG TCGCGACCGA TATCGCCGCA CGCGGCCTGG ATATCGATCA GTTGCCGCAT
GTCGTCAACT TCGAGCTGCC CAACGTCGAC GAAGACTACG TGCACCGTAT CGGTCGTACC
GGCCGTGCCG GTCGCTCTGG TGAAGCCATT TCGCTGGTTG CGCCGGACGA AGAGAAGCTG
CTCAAAAGCA TCGAGCGCAT GACCAAGCAG AAGATCGCCG ACGGCGACCT GATGGGCTTC
GACATCACTG CAGTCGAGGC TGAGAAGCCT GAAGTGCGTG AGCGTCCGGA TGTTCGCAAC
TCGCGTGGCG CACGTCCTGC ACGTGGCGAT GGCGACAAGA ACAACGGTGG TCGTCGCGAC
AAGGGCAAGG ATAAAGGCAA GGAAAAACCT GCTGCTGCCT CCGCCACTGG CGAACGCCCT
GCAAGGCAGC CACGCGAAAA AAAACCTCGT GAGGGCACGC CTCGCAGCGA ACAGCGTGCA
TCGCAACCCG CCACACCGCG CCCGGCAGCC GATCGTGCCC CTGACGAGTT CCGTGACGAT
GAAGTAGACA ACTTTGGCAA CCGCGCGGAC TACGTCAGTC CTTATCAGGG CAAAGGCCAG
AACCGTGGTC GTCGCCCTGC TGCCGCGCCT GGCGCAGCCG CACCGGCCGC TGGCGGCGCT
GCTCGCCCGG CCAATCCGGG TCGCCCTGCC GGTGGCGCTC GCAACGGCTC GGGCAGTGGC
GCGCCAAAGC GCAACGGCTC GGGTTCATCG GCACCACGCT CGCGTGATGG TCAGCCACGT
GGCCGTCGTC CGGCACGTGA AGACCAGCCC TTGCCACGTG AAGGTCAGGA GCCAGCCGCA
CGCGCACCAC GCGACGGCCA GCCTCAGCCG AAGATCGTGC ACAAGGAATC CAAGATCGAC
CGTTTCCCGT CTGCCGAGCA ACTGGACCAG TTGCCAAGCC GCCCACGCGG TGAAAAACCG
GCCCTGCTGA CCCGCAACCG CGACAGCTGA
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| Protein sequence | MSFASLGLSE ALVRAIEAAG YTQPTPVQQR AIPAVLQGRD LMVAAQTGTG KTGGFALPIL
ERLFPNGVPD KSQRHGPRQP RVLVLTPTRE LAAQVHESFK LYARDLKFVS ACIFGGVGMN
PQVQAMSRGV DVLVACPGRL LDLAGQGSVD LSHVEILVLD EADRMLDMGF VHDVKKVLAR
LPAKRQNLLF SATFSNDITS LAGKLLHNPE RIEVTPPNTT VERIEQRVFR LAANHKRSLL
AHLITVGAWE QVLVFTRTKH GANRLAEYLD KHGLAAVAIH GNKSQNARTK ALADFKAGDV
RIMVATDIAA RGLDIDQLPH VVNFELPNVD EDYVHRIGRT GRAGRSGEAI SLVAPDEEKL
LKSIERMTKQ KIADGDLMGF DITAVEAEKP EVRERPDVRN SRGARPARGD GDKNNGGRRD
KGKDKGKEKP AAASATGERP ARQPREKKPR EGTPRSEQRA SQPATPRPAA DRAPDEFRDD
EVDNFGNRAD YVSPYQGKGQ NRGRRPAAAP GAAAPAAGGA ARPANPGRPA GGARNGSGSG
APKRNGSGSS APRSRDGQPR GRRPAREDQP LPREGQEPAA RAPRDGQPQP KIVHKESKID
RFPSAEQLDQ LPSRPRGEKP ALLTRNRDS
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