Gene Psyr_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0454 
Symbol 
ID3365930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp489548 
End bp490954 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content61% 
IMG OID637650794 
Productadenosylmethionine--8-amino-7-oxononanoate transaminase 
Protein accessionYP_233562 
Protein GI66043721 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTCA ATGACCAGTG GATGCAACGT GACCTGAAGG TCCTGTGGCA CCCCTGCACC 
CAGATGAAAG ACCACGAAAA TCTGCCGTTG ATACCGATCA AGCGTGGTGA AGGCGTATGG
CTTGAAGACT TCGAGGGCAA GCGCTATCTG GACGCTGTCA GCTCCTGGTG GGTCAACGTT
TTCGGACACG CCAACCCGCG CATCAATCAG CGCATCAAGG ATCAGGTTGA CCAGCTGGAG
CACGTGATCC TCGCCGGTTT CAGCCATCAG CCAGTGATCG AGCTGTCCGA ACGGCTGGTC
AAACTCACGC CTGACGGACT GACCCGCTGC TTCTACGCCG ATAACGGCTC GTCGTGCATC
GAAGTCGCGC TGAAAATGAG CTTTCATTAC TGGCTCAATC GCGGCCAGCC GGACAAGAAA
CGCTTCGTCA CCCTGACCAA CAGCTACCAC GGCGAGACCA TGGCGGCGAT GTCGGTCGGT
GATGTGCCGC TGTTCACCGA AACCTACAAG GCGCTGCTGC TCGATACCAT CAAGGTGCCG
AGCCCCGATT GCTACCATCG CCCGGACGGC ATGAGCTGGG AAGAGCATTC GCGCAACATG
TTCGTCGCCA TGGAGCAGAC CCTCGCCGAG CACCACGCCA GCGTTGCAGC GGTGATCGTC
GAGCCGCTGA TCCAGGGCGC GGGCGGCATG CGCATGTATC ACCCGATCTA CCTCAAGCTG
CTGCGCGACG CCTGCGACCG CTATGGCGTG CACCTGATCC ACGACGAAAT CGCTGTCGGT
TTCGGCCGTA CCGGGACCAT GTTCGCCTGC GAACAGGCCG GCATTCGTCC GGACTTCCTG
TGCCTGTCCA AGGCGCTGAC CGGTGGCTAC CTGCCGCTGG CCGCCTGCCT GACCACCGAC
GATGTGTACG ACGCGTTCTA CGACGACTAC CCGACCCTGC GTGCGTTTCT GCACTCGCAC
AGTTACACCG GTAACCCGCT GGCCTGTGCG GCGGCGCTGG CGACCCTGGA TATCTTCGAG
CAGGACAACG TTATCGAAAA CAACAAGGCC CTTGCGCAAC GCATGGCGAC GGCCACTGCG
CATCTGGTGG ATCATCCGCA CGTCGCGGAA GTGCGTCAGA CCGGCATGGC CATCGCCATC
GAAATGGTTC AGGACAAGGC CACCAAGACC GCCTACCCGT GGCAGGAACG CCGCGGCATG
AAGGTCTTCC AGCATGCGCT GGAACGTGGC GCACTGCTGC GGCCGCTGGG CAGTGTGGTG
TATTTCCTGC CGCCGTACGT GATCACGCCG GAGCAGATCG ACTTCCTCGC CGAGGTGGCC
AGCGAAGGCA TTGATATCGC GACGCGCAGC AGTGTCAGTG TTGCGGTGCG CGAAAACTTT
CATCCGGACT TTCGCGATCC GGGTTAA
 
Protein sequence
MGLNDQWMQR DLKVLWHPCT QMKDHENLPL IPIKRGEGVW LEDFEGKRYL DAVSSWWVNV 
FGHANPRINQ RIKDQVDQLE HVILAGFSHQ PVIELSERLV KLTPDGLTRC FYADNGSSCI
EVALKMSFHY WLNRGQPDKK RFVTLTNSYH GETMAAMSVG DVPLFTETYK ALLLDTIKVP
SPDCYHRPDG MSWEEHSRNM FVAMEQTLAE HHASVAAVIV EPLIQGAGGM RMYHPIYLKL
LRDACDRYGV HLIHDEIAVG FGRTGTMFAC EQAGIRPDFL CLSKALTGGY LPLAACLTTD
DVYDAFYDDY PTLRAFLHSH SYTGNPLACA AALATLDIFE QDNVIENNKA LAQRMATATA
HLVDHPHVAE VRQTGMAIAI EMVQDKATKT AYPWQERRGM KVFQHALERG ALLRPLGSVV
YFLPPYVITP EQIDFLAEVA SEGIDIATRS SVSVAVRENF HPDFRDPG